Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00709 ATGGCTGGAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTCAGAATTCTTCTTTTAAGTCATTCATTATCACAAAGAAAGATGGTGCTGACTCTATTGGCAACAACTCCTTAAGAGTGCTTGCATTAGTTGGAGCTGGTGTCTCAGGGTTTCTAGGTTTTGCAACAACAGCATTTGCTGATGAAGCTGAGCATGGCCTGGCATGTCCTAGCTATCCATGGCCTCATAAGGGCATCCTTAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATCAAGAAGTCTGTGCTTCTTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTATACAGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCTTTCCCCAGCCATATGCAAATGAAGCAGCAGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTGTTACCAAAGCTCGTCACAATGGTCAGAACTATGTGTTTGCACTTCTAACTGGTTATCGTGACCCTCCTGCTGGTGTTTCGATTAGAGAAGGACTGCACTATAATCCTTATTTTCCTGGCGGGGCTATTGCTATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTACCCCTGCTACAGAATCTCAGATGGGTAAAGACATTGTATCATTCCTGACTTGGGCTGCGGAACCTGAGATGGAAGAGAGAAAACTGATGGGATTCAAATGGATATTTGTTCTATCACTGGCATTACTTCAAGCTGCCTATTACCGTCGGCTTAGGTGGTCCGTTCTAAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG 927 0.4401 MAGGVIRQLFRRKLQSHSPQNSSFKSFIITKKDGADSIGNNSLRVLALVGAGVSGFLGFATTAFADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLVTKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDIVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00709 308 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 20 308 - -
Gma05g00709 308 Gene3D - 68 263 IPR036909 GO:0009055|GO:0020037
Gma05g00709 308 SUPERFAMILY Cytochrome c 72 262 IPR036909 GO:0009055|GO:0020037
Gma05g00709 308 PANTHER CYTOCHROME C1 20 308 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 PRINTS Cytochrome C1 signature 77 96 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 PRINTS Cytochrome C1 signature 97 116 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 PRINTS Cytochrome C1 signature 142 162 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 PRINTS Cytochrome C1 signature 175 199 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 PRINTS Cytochrome C1 signature 213 224 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 PRINTS Cytochrome C1 signature 224 243 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 PRINTS Cytochrome C1 signature 244 263 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 PRINTS Cytochrome C1 signature 263 278 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 Pfam Cytochrome C1 family 79 295 IPR002326 GO:0009055|GO:0020037
Gma05g00709 308 Gene3D - 264 307 - -
Gma05g00709 308 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 263 307 IPR021157 -
Gma05g00709 308 ProSiteProfiles Cytochrome c family profile. 91 198 IPR009056 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00709 Gma-Chr5 8854104 8866316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00709 1 308 Chloroplast and Mitochondria Gene Families AT3G27240 82.792 5.86e-177 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00709 K00413 - gmx:100796742 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00709 05 8854104 8866316 Gma19g00808 19 32695225 32700050 GST