Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00688 ATGCAGGATACTGAACCTGATATAAAAAGGCACCCCCTGGAAGATGCAGAAAATGAATGTCCAATATCCCCTGAGGTGGTGATTGATATGGGGCAGGAGAGTCAGACTCAAAACCACAGTGATTTCTCCGTCTCAGACACTAACAAGGTCATTGACACCGAGAATGAGTGTACCAGTCCAAATGTTTGTCCTGTTGACAATAGTCACATGGAAATTAATGATGAATGCCAGACATCAAATATTTTCCATGTTGACAAATTTCCTACTAACGTCAGTAGTGGACAGTTGTGTGAGACTGAGAACCCCTGTGCTACCTTTGTTACAATGACTAGTACTGATGTAAAAAATGAGGAGGAAATATGTGTGGCACCCAAGATTGGCatggagtttgaatcagaagacactgcttacaaatgttatagcgagtatgctgtcctcaacggtttcagcataagaaaggattttgtcaacaaaagtaggataaatggtgcaGTGGTGTCCAGAAGATACACCTGCCATAGACAGGGTTATCGTCCTAGCAAAAATGGTACATACTTGAGGAAATTGAAGCAGGAAACAAGAACTGGTTGTTTGGCACACATGACTATTTCTCGTCAGCCGAATGGAAAGTTTTGTGTCATTAATTTTGAAACTGAGCACAATCACGAGTTAGTAACACCCTGTACTGCTCATATGTTACAATCACAGAAAAGATTGACTTTTGCTCAAGCTGTTGAAGCAAACTTAACCAAGTCAGGGTTGGATGGGGTACCAAAACTGGGAATGGGATTTGACTCAGAGGAGCATGCATATGAATTTTATAATACATATGCTGGACATGTAGGTTTCAGTGTAAGAAAAGATTATGTAAATAGGAGTAAAGTTGATGGTGCTGTGGCATCTAGACGATTTACTTGCTTCAGAGAAGGTTTTCGGCATAAAGACAAACAGGATACAAATGTAAAGAGACCTCGAAAGGATACTAGAATTGGATGTTTAGCACAACTGGTAATTTCTCGACAACCTGATGGTAGATATCATATTACTCACTTTGAAGAAAAGCATAATCATGAGCTTGTTGCTGCATGTAGAGTGCACATGTTAAGATCACAAAAGAAGCTAGCTACAACTCAAGTTGAAAAGAACATTGCAGATGGATCTAATGTGCTGCCCACGTCAACCTCTGAATCCAATTGCAAGGCTATTGAAGGCTTTGTTGATATGGATTGTGATCCCATGGGTCATGAATACaaactacctttcaaatggaattag 1275 0.3616 MQDTEPDIKRHPLEDAENECPISPEVVIDMGQESQTQNHSDFSVSDTNKVIDTENECTSPNVCPVDNSHMEINDECQTSNIFHVDKFPTNVSSGQLCETENPCATFVTMTSTDVKNEEEICVAPKIGMEFESEDTAYKCYSEYAVLNGFSIRKDFVNKSRINGAVVSRRYTCHRQGYRPSKNGTYLRKLKQETRTGCLAHMTISRQPNGKFCVINFETEHNHELVTPCTAHMLQSQKRLTFAQAVEANLTKSGLDGVPKLGMGFDSEEHAYEFYNTYAGHVGFSVRKDYVNRSKVDGAVASRRFTCFREGFRHKDKQDTNVKRPRKDTRIGCLAQLVISRQPDGRYHITHFEEKHNHELVAACRVHMLRSQKKLATTQVEKNIADGSNVLPTSTSESNCKAIEGFVDMDCDPMGHEYKLPFKWN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00688 424 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 240 IPR031052 GO:0006355
Gma05g00688 424 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 250 388 - -
Gma05g00688 424 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 77 240 - -
Gma05g00688 424 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 250 388 IPR031052 GO:0006355
Gma05g00688 424 MobiDBLite consensus disorder prediction 1 20 - -
Gma05g00688 424 MobiDBLite consensus disorder prediction 1 18 - -
Gma05g00688 424 Pfam FAR1 DNA-binding domain 140 225 IPR004330 -
Gma05g00688 424 Pfam FAR1 DNA-binding domain 272 360 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00688 Gma-Chr5 8055999 8058072 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma05g00688 FAR1 5.5e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00688 K17604 - gmx:102659753 877.47