Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00675 ATGCATGAGATACTTTTAATTTCTTTGGTTGTTTTGGAGCTTCACAAAGAGTATGTTAGAAAGCCAGAAAATCGTTTTGTGAGATTTTTTCTGTGGCTTGCTACTGCAGTTGGAGCTTTAGAAGTGGTTTGCTTTTTGATAATTTGGGTTTTTTTGATTAAGACGCGTCAAAAGTCTGGTGCAGATCAACAAGGCTACCATCAAGCAGAAATGTGGTTCAGAAAATATAGTTATTCTGAATTGAAGGAGGTGACTAAAGGGTTCAACCAAGAGATTTCAAGGGGTGCAGAAGGGATTGTGTACAAAGGCATTTTATCAGATCAAAGACATGTAGCAATTAAGAGACTCTATGAAGCCAAACAAGGAGAAGAGGAATTCCTTGCTGAAGTGAGCAGCATTGGAAGGCTCAATCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCACAAAATCTCTCATCCAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACGGCACGAGTTTTAGCATATCTGCATGAAGAATGCTTGGAGTGGATACTGCACTGTGATATAAAGCCTCAAAACATACTTCTTGATGCTAATTATCAGCCCAAGGTAGCAGATTTTGGGTTGTCCAAGCTACTAAACAGAAATAACCTCAACAACAATTTAAGGTTTTCAGTGATCAGAGGAACTCGAGGATATATGGCACCGGAGTGGGTATACAACACACCAATCACCTCCAAAGTAGATGTTTACTGCTATGAAATTGTTCTATTGGAGATGATAACTGGGAAAAACCCAACAACTGGTGTCCATAGCAATGCTGGAGAAGAATCATATAATGGAAGGCTGGTAACATGGGTTAGAGAGAAAAGGGGTGACGCATCTTGGCTAGAGCACATCATTGATCCTGCCATTAAAACAAATTTCGATGAATGTAAGATGGACCTCTTGGCTAGAGTGGCTTTGGATTGTGTTGAGGTAAATAAGGATCGGAGACCCACCATGAGCCAAGTAGTAGAAATGCTTCAAAGCCATGATTGTTTAAGGTGTTGA 1107 0.4002 MHEILLISLVVLELHKEYVRKPENRFVRFFLWLATAVGALEVVCFLIIWVFLIKTRQKSGADQQGYHQAEMWFRKYSYSELKEVTKGFNQEISRGAEGIVYKGILSDQRHVAIKRLYEAKQGEEEFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAQNLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLLNRNNLNNNLRFSVIRGTRGYMAPEWVYNTPITSKVDVYCYEIVLLEMITGKNPTTGVHSNAGEESYNGRLVTWVREKRGDASWLEHIIDPAIKTNFDECKMDLLARVALDCVEVNKDRRPTMSQVVEMLQSHDCLRC 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00675 368 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 12 365 - -
Gma05g00675 368 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 12 365 - -
Gma05g00675 368 CDD STKc_IRAK 92 361 - -
Gma05g00675 368 Gene3D Phosphorylase Kinase; domain 1 51 160 - -
Gma05g00675 368 Pfam Protein kinase domain 90 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00675 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Gma05g00675 368 ProSiteProfiles Protein kinase domain profile. 86 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00675 368 Gene3D Transferase(Phosphotransferase) domain 1 161 366 - -
Gma05g00675 368 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
Gma05g00675 368 SMART serkin_6 86 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00675 Gma-Chr5 7746677 7748207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00675 4 362 Trihelix Transcription Factor Family AT5G38560 37.368 2.71e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma05g00675 Pkinase 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00675 - - gmx:100815234 715.687