Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00664 ATGGTTTTCTCTGCCAATGATTTACAAGAATGGAAAGATTTTCCCAAAGGGCTCAAGGTTCTTCTCCTTGAGAGAGACAACATTTCTGCTGCCGAGATAAGGGCAAAGCTTGAAGCCATGGACTACAATGTTTCTACATTCTGTGAGGAGAATGAAGCCTTGTCAGCAATCTCAAGTGGACTCGAAAGCTTCCACATTGCCATAGTGGAGGTGAGTTCAAGCAGTGGCCAGGGAGGTTTCAAATTTCTTGAGAATGCCAAGGACTTGCCAACCATTATGACTTCAAACAATCATTGCTTGAACACCATGATGAAGTGCATAGCGCTTGGTGCAGTTGAGTTCCTCAGAAAACCACTATCTGAGGACAAGCTCAGAAATATCTGGCAGCATGTGGTTCACAAGGCATTCAATGCCAGGGCAAGCATCCTGTCTGAATCACTTAAACCTGTCAAAGAATCTGTAGTGTCCATGTTGCAGCTCCAAACAGACGATGAACAACATGAAAGTAGAGTATCCAGGGATATAGAGAAAGTATCCCGCTTTGTTGATAATGATCATGAGTTGTCTTCTGGAAATGATAAATATCCAGCTCCTTCAACCCCACAATTGAGACAAGGGACGAGATTGTTGGATGATGGTGATTGCCAAGAGCAGACTAATTGCTCCACAGGAAAAGAAAGTGGGGAACATGAAGGAGAATCTAAATCTGTCGAAACTACATGTGGTAATTTGAATGctgaaattgaaagtactcctcaacaaaggaaatctgaaattactttggttaaggaggaagtGGATATTGTTGATGCTTCCAAGGGTGAGAGTGTTGCTTCTCCACATACACAAAAAAGAAAAGTTCTAAGCAACACTGACAGAAATACAAAAGCTTTAATCAAAGTAGGTGTTCATAGTGATTCATGTGAGATAAGAGGAAATCAGAAAAAGATAAAAGTAGACTGGACACCTGAGCTGCACAAAACGTTTGTGAAGGCAGTGGAGCAACTAGGCATTGATCAAGCCATTCCTTCTCGAATATTGGAATTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTCCAGAAGTATAGAATGCATAAGAGACAAATCTTGCCCAAGGAAGAACGAAAATGGTTGAATCTAAGAGAAAGGAGCTATTGTGTTAAAAGACCAATTATGGCATTTCCTCCATATCATTCTAATCACACCCTTCCTCTGCCTCCTGTATATCCTATGTGGGGACAATCTGGCAGTCCAACGGCTGGCATGCAGATTTGGGGCTCTCCAGGTTATCCCTTTTGGCATACTACTGCTGAAAATTGGCACTGGAAACCATTTCCAGGGATGCATGCAGATGCATGGGGCTGTCCAGTGTTACCATTACCACCTCCTCAAACTCCTGGTTTTCCCTACTCTCAGAATATGCCTTCGTTGCTCAATGCTGATGCAGTGGATCACACATTTACCATGCCACAAAGTTCCTTCGAGCATTATCCGGCAGAGGAGGTAGTTGACAAGGTGGTGAAAGAGGCAATAAGCAAACCATGGCTACCCTTGCCCTTGGGTTTGAAACCTCCTTCCCCAGATAGTGTGTTGGCTGAGCTATCCAGGCAAGGCATTTCCAACATCCCTCCAAAGGGTTCAAATTCATGCTGA 1668 0.4215 MVFSANDLQEWKDFPKGLKVLLLERDNISAAEIRAKLEAMDYNVSTFCEENEALSAISSGLESFHIAIVEVSSSSGQGGFKFLENAKDLPTIMTSNNHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQHVVHKAFNARASILSESLKPVKESVVSMLQLQTDDEQHESRVSRDIEKVSRFVDNDHELSSGNDKYPAPSTPQLRQGTRLLDDGDCQEQTNCSTGKESGEHEGESKSVETTCGNLNAEIESTPQQRKSEITLVKEEVDIVDASKGESVASPHTQKRKVLSNTDRNTKALIKVGVHSDSCEIRGNQKKIKVDWTPELHKTFVKAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQILPKEERKWLNLRERSYCVKRPIMAFPPYHSNHTLPLPPVYPMWGQSGSPTAGMQIWGSPGYPFWHTTAENWHWKPFPGMHADAWGCPVLPLPPPQTPGFPYSQNMPSLLNADAVDHTFTMPQSSFEHYPAEEVVDKVVKEAISKPWLPLPLGLKPPSPDSVLAELSRQGISNIPPKGSNSC 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00664 555 Pfam Myb-like DNA-binding domain 319 368 IPR001005 -
Gma05g00664 555 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 553 IPR044825 GO:0003700|GO:0045893
Gma05g00664 555 SUPERFAMILY CheY-like 16 138 IPR011006 -
Gma05g00664 555 SMART REC_2 18 128 IPR001789 GO:0000160
Gma05g00664 555 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 313 372 IPR017930 -
Gma05g00664 555 MobiDBLite consensus disorder prediction 193 223 - -
Gma05g00664 555 SUPERFAMILY Homeodomain-like 315 373 IPR009057 -
Gma05g00664 555 Gene3D - 15 135 - -
Gma05g00664 555 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Gma05g00664 555 Gene3D - 313 374 - -
Gma05g00664 555 MobiDBLite consensus disorder prediction 161 238 - -
Gma05g00664 555 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 316 371 IPR006447 GO:0003677
Gma05g00664 555 MobiDBLite consensus disorder prediction 163 190 - -
Gma05g00664 555 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR2 1 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00664 Gma-Chr5 7385860 7392700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00664 1 555 Response Regulator Gene Family AT4G18020 48.918 1.06e-138 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gma05g00664 Myb_DNA-binding 3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00664 - - gmx:100820385 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01397 17 12993611 12999991 Gma05g00664 05 7385860 7392700 GST
Gma01g02037 01 55769647 55774524 Gma05g00664 05 7385860 7392700 PCT
Gma11g00376 11 3058196 3063365 Gma05g00664 05 7385860 7392700 PCT
Gma05g00664 05 7385860 7392700 Gma01g02037 01 55769647 55774524 PCT
Gma05g00664 05 7385860 7392700 Gma11g00376 11 3058196 3063365 PCT