Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00650 ATGGCTCTCTCTCTTTTGTGTCCTCTTCTTGCCACCTTTCTTTTCATGCAAACTATGGCAGATACTTCATTTGTTCAATCTCGTGCAGCATTTTACCCAAACTCTCAAGAAAATGGCACAGACGTTGGTGCATGTGAATTTGGTTCCTTTGGTGCCACTGTTAATGGTGGGGACGTATCAGCTGCATCTAATCTTTATCGAAATGGTGTTGGCTGTGGTGCCTGTTACCAGgtgagatgtggcaatagtgctttatgctcaggcaatggtgtgactgtggttataactgaccaaggctcaggtcataacactgacttcattcttagccaacgagcctttgggagaatggctctgaacactgacgcagctgcttctctattagctcttggtgttgttgatattcagtatagacgtgtttcatgcagctacccaaacaaaaacattacagttaagatacatgagagcagcaacaaccctcactatttggcttttgtcatatggtttcaacaaggaaatagagacataactgctgtccagatttgtgagactcagaactttgtgtgcaagttactggaccggagtcatggggcagtttggaccactacagctccacctagtggacctttgtctttaaggatgttgtttagtcctgaagaagagggagaagaaacatgggtggttcctgttaacaagataccacaagactggaaggctggacaaacgtacgacttaggggtacaagtggaccaatag 753 0.1355 MALSLLCPLLATFLFMQTMADTSFVQSRAAFYPNSQENGTDVGACEFGSFGATVNGGDVSAASNLYRNGVGCGACYQVRCGNSALCSGNGVTVVITDQGSGHNTDFILSQRAFGRMALNTDAAASLLALGVVDIQYRRVSCSYPNKNITVKIHESSNNPHYLAFVIWFQQGNRDITAVQICETQNFVCKLLDRSHGAVWTTTAPPSGPLSLRMLFSPEEEGEETWVVPVNKIPQDWKAGQTYDLGVQVDQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00650 250 SUPERFAMILY PHL pollen allergen 146 243 IPR036749 -
Gma05g00650 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 146 IPR007112 -
Gma05g00650 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 160 244 IPR007117 -
Gma05g00650 250 Gene3D - 143 248 IPR036749 -
Gma05g00650 250 Gene3D - 10 142 IPR036908 -
Gma05g00650 250 SUPERFAMILY Barwin-like endoglucanases 12 145 IPR036908 -
Gma05g00650 250 PRINTS Expansin/Lol pI family signature 41 59 IPR007118 GO:0005576
Gma05g00650 250 PRINTS Expansin/Lol pI family signature 129 145 IPR007118 GO:0005576
Gma05g00650 250 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Gma05g00650 250 Pfam Lytic transglycolase 62 136 IPR009009 -
Gma05g00650 250 Pfam Expansin C-terminal domain 148 219 IPR007117 -
Gma05g00650 250 PANTHER EXPANSIN-B3 4 249 - -
Gma05g00650 250 PANTHER POLLEN ALLERGEN ORY S 1, PUTATIVE-RELATED 4 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00650 Gma-Chr5 7177904 7180178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00650 2 243 Expansin Gene Family AT4G17030 41.975 7.52e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00650 - - gmx:100812555 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01388 17 12852727 12854959 Gma05g00650 05 7177904 7180178 GST
Gma01g02045 01 55834197 55836086 Gma05g00650 05 7177904 7180178 PCT
Gma11g00369 11 3021842 3023878 Gma05g00650 05 7177904 7180178 PCT
Gma05g00650 05 7177904 7180178 Gma01g02045 01 55834197 55836086 PCT
Gma05g00650 05 7177904 7180178 Gma11g00369 11 3021842 3023878 PCT