Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00638 ATGAAGTGTTTCTTCTTTAAGGAGAAGAGCAAATCCGCCCCGGAACTGCACAAGAAGAAAACCCCCGCCGTGAACCGCGCCGCAAACTCCACCGGCTCAGTGTCTTCACCGAAGAGCGTGAAGGACTTGTACAGAGAGAAAGAGCACAGCTTCAGAGTTTTCACTTTGCAGGAGCTGAGAGATGCCACCAACGGTTTCAATAGGATGCTCAAGCTTGGAGAAGGGGGTTTCGGGAGTGTGTATAAAGGATCCATTGCGCAACTTGATGGCCAAGGTGATCCAATTCCAGTTGCTATCAAAAGGCTCAACACTCGTGGCTTCCAGGGTCATAAAGAATGGCTTGCTGAGGTTCAATTTCTCGGCATTGTTAATCACCCAAATTTGGTTAAACTTTTGGGATACTGCTCTGTGGATGGAGAAAGAGGAATCCAACGGCTGTTAGTGTATGAGTTCATGCCCAACAGGAGCTTGGAGGATCACCTTTTCAACAAAAAATTGCCAACCCTGCCTTGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCACAAGGATTAGCTTATCTACATGAGGGACTGGAAATTCAGGTGATCTACCGAGATTTCAAATCTTCAAACGTTCTATTAGATGCGGATTTCCACCCAAAGCTCTCAGATTTCGGTCTAGCTAGAGAAGGACCTCAGGGTGATCAGACTCATGTATCTACTGCGGTAGTTGGAACACAGGGTTATGCTGCACCAGAGTACATTGAAACGGGCCACCTGAAAGTTCAGAGTGACATGTGGAGTTTTGGTGTAGTACTATATGAGATCCTCACAGGAAGGAGGTCATTGGAAAGAAACCGTCCCACAGCAGAACAAAAGCTTCTAGATTGGGTCAAACAATACCCTGCTGACACCAGCCGATTCGTCATCATAATGGACCCTCGTCTCAGAAACCAGTATTCTCTTCCTGCAGCTCGCAAAATAGCCAAGTTGGCTGATAGCTGCTTGAAGAAGAATCCAGAAGATAGACCCTCCATGAGTCAGATAGTGGAATCCTTGAATCAAGCATTGCAATATTCAGACACTTCTCTAGACATTGCTGAATCCTCCTCCTCCTCCTCATCTCGGTCTAAATTGGTCCGAAAAAAGTAA 1134 0.463 MKCFFFKEKSKSAPELHKKKTPAVNRAANSTGSVSSPKSVKDLYREKEHSFRVFTLQELRDATNGFNRMLKLGEGGFGSVYKGSIAQLDGQGDPIPVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLEDHLFNKKLPTLPWKTRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDADFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKQYPADTSRFVIIMDPRLRNQYSLPAARKIAKLADSCLKKNPEDRPSMSQIVESLNQALQYSDTSLDIAESSSSSSSRSKLVRKK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00638 377 CDD STKc_IRAK 72 349 - -
Gma05g00638 377 Gene3D Transferase(Phosphotransferase) domain 1 152 371 - -
Gma05g00638 377 Gene3D Phosphorylase Kinase; domain 1 46 151 - -
Gma05g00638 377 ProSitePatterns Protein kinases ATP-binding region signature. 72 100 IPR017441 GO:0005524
Gma05g00638 377 Pfam Protein tyrosine and serine/threonine kinase 70 347 IPR001245 GO:0004672|GO:0006468
Gma05g00638 377 MobiDBLite consensus disorder prediction 24 38 - -
Gma05g00638 377 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 17 371 - -
Gma05g00638 377 MobiDBLite consensus disorder prediction 15 39 - -
Gma05g00638 377 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00638 377 PANTHER OS01G0588500 PROTEIN-RELATED 17 371 - -
Gma05g00638 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Gma05g00638 377 MobiDBLite consensus disorder prediction 357 377 - -
Gma05g00638 377 SUPERFAMILY Protein kinase-like (PK-like) 48 347 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00638 Gma-Chr5 6884688 6887807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00638 3 347 Glycoside Hydrolase AT3G07070 42.737 1.49e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma05g00638 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00638 - K00924 gmx:100305403 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00638 05 6884688 6887807 Gma05g00638 05 6884688 6887807 ECH
Gma17g01374 17 12646432 12649496 Gma05g00638 05 6884688 6887807 GST
Gma01g02061 01 56003376 56006438 Gma05g00638 05 6884688 6887807 PCT
Gma11g00355 11 2836368 2838879 Gma05g00638 05 6884688 6887807 PCT
Gma05g00638 05 6884688 6887807 Gma01g02061 01 56003376 56006438 PCT
Gma05g00638 05 6884688 6887807 Gma11g00355 11 2836368 2838879 PCT