Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00628 ATGCCTAAAGTTAATGAAGAAACTGGTAAGTTTTCATATGAAGCTGAATCACCAAATGAGGCAGCTTTTGTGATTGTAGCCAGGGAACTTGGATTTGAATTTTATGATAGGACACATGCAACTATTTCACTGCGTCAATTAGACACCATATCAGACCAGAAAATCAACAAGTCCTACAAACTTTTGAATATATTAGAGTTTACTAGTGCAAGAAAGCGGATGTCTGTAATTGTGAAAGATGTGGAGGGGAAACTATTACTACTAAGCAAAGGGGCTGACAGTGTAATGTTTGAACAAATTGCAAAGAATGGAAGGGATTTTGAAGAGAAGACAAAGCAGTACATTAGTGAATATGCTGATTCTGGTTTGAGGGCCTTGATACTTGCATATCGTGAACTTAATGATGAAGAGTAA 414 0.3671 MPKVNEETGKFSYEAESPNEAAFVIVARELGFEFYDRTHATISLRQLDTISDQKINKSYKLLNILEFTSARKRMSVIVKDVEGKLLLLSKGADSVMFEQIAKNGRDFEEKTKQYISEYADSGLRALILAYRELNDEE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00628 137 Gene3D - 1 137 IPR023299 GO:0000166
Gma05g00628 137 Pfam Cation transport ATPase (P-type) 13 99 - -
Gma05g00628 137 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 137 - -
Gma05g00628 137 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 14 134 IPR023299 GO:0000166
Gma05g00628 137 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00628 Gma-Chr5 6779549 6779962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00628 1 137 Primary Pumps ATPases AT1G68710 64.964 4.86e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00628 K01530 - gmx:100799312 239.965