Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00614 ATGGAGCTTAGTTTTAAGCACCAACTTGGCCTTGTTTGTGTCATACTGCTCTTTCCTGCACTGTGTTATTGCCAGGAATATACTAAATCCAGGGCAACCTTTTATAGTACCTCTGATGGCTATGGGACTCCAACCGGAGCTTGTGGCTTTGGTGAATATGGAAGGAAAATGAATTGGTATGGTGGAAGAGTGGCTGGGGTGTCTGGGCTGTGGAGGAATGGAGCTGGCTGTGGCACATGTTATCAGGTGAGATGCCTAGTACCAGAATTATGTGATACCAATGGAGCATACCTGGTGGCAACAGACCAAGGTTATGGAGACAGAACAGACTTCGTCATGAGCCCACGCGCCTTCTTGAAATTGGGACGCAATGAATATTCATCTGAAGAGCTTAAGAAATACGGTACAGTGGATATTGAATACAAAAGGGTTCCATGTACATACACCGGCAATGTCTTGTTCCACATCAAGGAAACTAGCACCAACCCTGGTTACTTTGCTTTGGTCATTCTCAATGTTAATGGCATACACGATGTCACTGCTGTTGAATTGTATCAGAAGAGTCAACAAAGATGGGAACCACTGCGCAGGTCCTATGGGGCAGTGTTTGACTTTGCTAACCCACCCAGTGGTGAAATCCTCTTGAGGTTTAAAGCGGGCTTTTGGAAGCAGGCGAAAATCCCTGCTAATTGGAAGCCTGGAGCAACTTATGACACCAAAGTTCAGATCCCAGGAACATATTACAAATAA 750 0.4533 MELSFKHQLGLVCVILLFPALCYCQEYTKSRATFYSTSDGYGTPTGACGFGEYGRKMNWYGGRVAGVSGLWRNGAGCGTCYQVRCLVPELCDTNGAYLVATDQGYGDRTDFVMSPRAFLKLGRNEYSSEELKKYGTVDIEYKRVPCTYTGNVLFHIKETSTNPGYFALVILNVNGIHDVTAVELYQKSQQRWEPLRRSYGAVFDFANPPSGEILLRFKAGFWKQAKIPANWKPGATYDTKVQIPGTYYK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00614 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 239 IPR007117 -
Gma05g00614 249 SUPERFAMILY Barwin-like endoglucanases 13 151 IPR036908 -
Gma05g00614 249 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Gma05g00614 249 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Gma05g00614 249 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Gma05g00614 249 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Gma05g00614 249 Gene3D - 148 243 IPR036749 -
Gma05g00614 249 PANTHER EXPANSIN-B3 4 243 - -
Gma05g00614 249 SUPERFAMILY PHL pollen allergen 151 238 IPR036749 -
Gma05g00614 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 151 IPR007112 -
Gma05g00614 249 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 243 - -
Gma05g00614 249 Pfam Lytic transglycolase 64 141 IPR009009 -
Gma05g00614 249 Gene3D - 19 147 IPR036908 -
Gma05g00614 249 Pfam Expansin C-terminal domain 153 219 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00614 Gma-Chr5 6440908 6478847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00614 1 243 Expansin Gene Family AT4G17030 45.238 3.17e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00614 - - gmx:100777265 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01354 17 12344359 12401851 Gma05g00614 05 6440908 6478847 GST