Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00585 ATGGTCATGGAAGAATCTAACCCATTAGACAATGAAGTTCAACCAACCACTTCATCATCCTCTTTCACCATTACTACTCCCTCTACCTCCTCTTCTTCCTCCATAGAAGAAGCCACTAACACTACAAAGGAGAAAAAGAAGAAAGCCAATAGTAATGAAGGCAAGCACCCTACGTATAGAGGAGTTCGCATGCGTCAATGGGGCAAATGGGTATCCGAAATTAGAGAGCCAAGGAAGAAATCAAGAATTTGGCTTGGTACTTTTCCCACGCCCGATATGGCGGCTCGAGCCCATGACGTGGCGGCTCTCACGATCAAAGGCAGCTCGGCTTACCTCAATTTCCCAGAATTAGCCGACGAGCTGCCCCGCCCCGCCAGCACCTCCCCCAAGGACATCCAAGCTGCGGCGGCTAAAGCCGCTGCCTTGGATTTCGGCCACCGAAGCCATGACGCCGAGTCCGAGCTGAGCCGAGCCGTTTCCTCCTCAATCCTCACACAAGCATCATCATCATCATCCAATTCATCATCGTTGAAGGGTGTGGATGACACATTCTTGGACCTTCCTGATCTCTCTCTCGACTTGAGCCATGGAGCCGATGAGTTTCATTATTCGTCAGCTTGGCTTGTAGCCGGAGCCGAACATATAGAGCTGGGTTTTCGGCTTGAGGATCCTTTTCTATGGGAATCATATTAA 693 0.5022 MVMEESNPLDNEVQPTTSSSSFTITTPSTSSSSSIEEATNTTKEKKKKANSNEGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELADELPRPASTSPKDIQAAAAKAAALDFGHRSHDAESELSRAVSSSILTQASSSSSNSSSLKGVDDTFLDLPDLSLDLSHGADEFHYSSAWLVAGAEHIELGFRLEDPFLWESY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00585 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 15 215 - -
Gma05g00585 230 MobiDBLite consensus disorder prediction 9 38 - -
Gma05g00585 230 Pfam AP2 domain 57 107 IPR001471 GO:0003700|GO:0006355
Gma05g00585 230 MobiDBLite consensus disorder prediction 39 59 - -
Gma05g00585 230 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
Gma05g00585 230 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Gma05g00585 230 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
Gma05g00585 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 215 - -
Gma05g00585 230 MobiDBLite consensus disorder prediction 1 59 - -
Gma05g00585 230 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Gma05g00585 230 SUPERFAMILY DNA-binding domain 58 116 IPR016177 GO:0003677
Gma05g00585 230 CDD AP2 59 117 IPR001471 GO:0003700|GO:0006355
Gma05g00585 230 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00585 Gma-Chr5 5873277 5873969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00585 45 226 AP2-EREBP Transcription Factor Family AT2G44940 50.711 5.21e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma05g00585 AP2 9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00585 - - gmx:100101914 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00585 05 5873277 5873969 Gma05g00585 05 5873277 5873969 ECH
Gma17g01326 17 11960830 11961977 Gma05g00585 05 5873277 5873969 GST