Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00583 atggcaccaagggTTAATGATGGAACAATAACAAGCAAGAGAGCAATGAACAGAGGAGCATGGACCCCAGAGGAGGACAGAAAGCTAGCCCAGTGCATTGAAATTCATGGTCCAAAGAGGTGGAAGACTGTTGCAATCAAATCAGCTGGGAGGCTTCCAGGACGAACAGATAATGAAATTAAGAATTATTGGAATTCTCATTTGTGCAAAAAAGTGAATCAGAAAGTGGAGAAACCAGAAAGTTCCACGAGACACGAAATTATTGGCCAGAATGATCAGAATGCTGGGGATAACCGTGCAATGTCAGAGAACGAGGTTGAAATTAATGAAAGTGGTAACTTAGATGTTAGTTTGGACGTGAACGAATTTTTCAACTTCTCTGAGGAATCCTTTGGGTTTGATTGGCTGAACAAGTACTTAGAACTTGACCAGATTCCTGAGAGCACAGAAAGATCTGAATGA 462 0.3983 MAPRVNDGTITSKRAMNRGAWTPEEDRKLAQCIEIHGPKRWKTVAIKSAGRLPGRTDNEIKNYWNSHLCKKVNQKVEKPESSTRHEIIGQNDQNAGDNRAMSENEVEINESGNLDVSLDVNEFFNFSEESFGFDWLNKYLELDQIPESTERSE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00583 153 MobiDBLite consensus disorder prediction 76 104 - -
Gma05g00583 153 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 49 151 - -
Gma05g00583 153 MobiDBLite consensus disorder prediction 86 104 - -
Gma05g00583 153 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 48 - -
Gma05g00583 153 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 49 151 - -
Gma05g00583 153 CDD SANT 20 68 IPR001005 -
Gma05g00583 153 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 72 IPR017930 -
Gma05g00583 153 MobiDBLite consensus disorder prediction 1 24 - -
Gma05g00583 153 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 4 48 - -
Gma05g00583 153 Pfam Myb-like DNA-binding domain 18 68 IPR001005 -
Gma05g00583 153 Gene3D - 16 74 - -
Gma05g00583 153 ProSiteProfiles Myb-like domain profile. 13 68 IPR001005 -
Gma05g00583 153 SUPERFAMILY Homeodomain-like 13 73 IPR009057 -
Gma05g00583 153 SMART sant 17 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00583 Gma-Chr5 5819261 5821424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00583 16 131 MYB Transcription Factor Family AT1G09540 31.746 1.87e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma05g00583 Myb_DNA-binding 2.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00583 K09422 - gmx:100799575 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01324 17 11901682 11903697 Gma05g00583 05 5819261 5821424 GST
Gma11g00318 11 2560766 2561824 Gma05g00583 05 5819261 5821424 PCT
Gma05g00583 05 5819261 5821424 Gma11g00318 11 2560766 2561824 PCT