Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00566 ATGATGAATGGGGGAATGATTGAAGATATAGCAATAATTGGAGGGTTGATAGGGGTGCAATTTGTTTACGCAGGGAATGCTGTGTTGCTCAGTTATCTTATGTCTTTGGGCCTCGAATCTCTTACCCTTGTCATTTTTACTTCCTTTGCTACCTTCCTTATTCTCCTACCCCTTGCCTTCTATTATGAAAGGTATAAATGGCCAACGAGAGTCAGTTTCAAGTTGCTTATACAGCTTCTCTTGCTTTCGTTAGGAGGGGTAACATTGTTCCAGTCTCTATTCCTTAAAGGAATCAATCTAACCTCGCCAGCAATGGGAACAGCCATGCCAAACCTTGCACCAGGTCTTATCTTCATCATCGCATGGATTTTTCGGTTGGAAAAAGTCGACTTGAGCTGCACATATAGTAGAGTGAAAATCATTGGCACATTCCTTTGTGTCTTGGGGGCTCTCACAATGAGCATACTGCAAAGCATCTCTACAACACCTATTACCGCTAAAGAGGGAACAATTCAATTATTATCTCCACCAAATGTAACGTTTGACAGACACAAGATAATCGGTTGTCTCTATCTCTTGGTCGCAATCCTCATATTATCAAGCAACATTGTCCTCCAGGCCTTTACTCTAGGAGATTTTCCTGCACCGATGTCCTTGTGTGCAATAACTTCGTTTTTCGGGACGTTCATGACTGCCGCAGTTCAATTAGTTGAAGATCACGAATTCAAAACAGGTTGGCCAATTGTGGGTGTTGGAGACATGATTGCCTATTCTCTTCTGGCAGGTGCAGTGAATGGAATATGCTTGAGCGTCAATGGTTGGGCACTTGAGAAGAGAGGGCCAGTGTTGATCTCCATGTTCAGCCCTATTGGCACAGTCTGCTCTGTCATTTTCTCAGTTGTTACTCTAGGACAAACCATTAATATTGGAAGCTTTGCCGGTATGTTCCTCATGTTCACTGGGCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGGCTTTGCAAAAGGAGGTGGCTTAGAGAGTGAGTATGATGCAGAGAAGCCTCTCTTAAGTTAA 1059 0.4334 MMNGGMIEDIAIIGGLIGVQFVYAGNAVLLSYLMSLGLESLTLVIFTSFATFLILLPLAFYYERYKWPTRVSFKLLIQLLLLSLGGVTLFQSLFLKGINLTSPAMGTAMPNLAPGLIFIIAWIFRLEKVDLSCTYSRVKIIGTFLCVLGALTMSILQSISTTPITAKEGTIQLLSPPNVTFDRHKIIGCLYLLVAILILSSNIVLQAFTLGDFPAPMSLCAITSFFGTFMTAAVQLVEDHEFKTGWPIVGVGDMIAYSLLAGAVNGICLSVNGWALEKRGPVLISMFSPIGTVCSVIFSVVTLGQTINIGSFAGMFLMFTGLYFVLWAKGKEGFAKGGGLESEYDAEKPLLS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00566 352 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Gma05g00566 352 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020|GO:0016021
Gma05g00566 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 330 - -
Gma05g00566 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 155 - -
Gma05g00566 352 PANTHER WAT1-RELATED PROTEIN 10 352 IPR030184 GO:0016021|GO:0022857
Gma05g00566 352 PANTHER OS11G0588100 PROTEIN 10 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00566 Gma-Chr5 5617727 5620970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00566 2 343 Nodulin-like Gene Family AT5G47470 56.268 1.27e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00566 - - gmx:100809182 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01312 17 11799960 11812937 Gma05g00566 05 5617727 5620970 GST