Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00558 ATGATTTCTGTGTTCCCCAAAACCCTAATCGCCACTCGTTTCCTTTCCCGAACCCGACCTCGAATACATACTCCCAAACTAACCGCCATTAGAACCATGAGCTCGTCCACCCAGCGCATGTTCCAGCTCAAGCTTGACCCAATAACGGGTAACTCTGAATGGGTCGTCATCGAAGACAACGACGACGGAGACGAAAGCTTCGCCCATAATTTCCACCAACCCCTCCTCGCCACGACGTCGTATCTGGACATGCTCAACGACTCCCCCAGAAACACTGCGTTTCGCCAAGCCATTCAAAAAACCATCACCAAACCTTGCCACGTTCTCGATATCGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTGCACGTGCCATGGGTGATGAAGGGAGGGTCACGGCGTGTGAGTCTTACCTTCCGATGGTGAAGCTGATGAAGAAGGTGCTGCGGATTAATGGCATGGAGGGAAGAGTCAAGGTCATCAACAAGCGCTCGGATGAACTCGAAGTTGGTCTCGATATCCCTTCGCGTGCAGATGCTCTTGTGAGCGAGATACTTGATTCAGAGCTGCTGGGCGAGGGGCTTATACCGACCCTACAACATGCACATGACAATTTGTTGGTAGAAAATGCTCTGACTGTGCCATATCGAGCAACTACATATGGACAGCTGGTTGAAAGCACATTCTTATGGCAGTTGCATGATTTGCATAGCATTGAGGCTACTGTATCTGATGGCATTCAACTTACTCCTCCAGGACTTGATAGTGTGTTAAGTGTCAAACGTCAGCAATATGCCATGCATTGCAATCCTATACAAGAAGAAATAAAACTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTCTGGAGAAACTGAGCTGTGTGTAAAGGCAACTAATGATGGGAGAATTCATGCTGTGGTCTCTTGGTGGGTACTTCAACTTGATCGTGAAGGGACCATCTATTATTCCACTGCTCCTAGGTGGATAAGCTCACCAACAATTACAAGTCCTGTTGGTTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCCGGCAGTGGTATTTCCATATTCAAAGGGGAAGAAATTCATTTACATGCTACTCATACTGAGACAAGTATCTCATATAATTTAGATACTCAAGTACCTACATCTGAGATTTTGAACCATAGGTGTATGACTGGAGATTTGCAGCTTGTACTGCCACCAGAAAGGGTTGCAATCTATGGAGACAAAGGATGGAGGCTTTCAATGTTGAAAGCAGTACAAAGCATGTTGCAGGGAAGAGATCACCCGTTATGCTTAGTTGCAGATGATAGTGTGTTTTTACCTCTTCTTGTGGCACAGCTTTCAGAAGCATCACATGTAATGTCATTACTTCCGGGGCTTAAGGAAAGAGGCCTACAATATTTGCAAGCGGCTGCCCATGCAAATGGTTTGTCACGTAATTGCATAGAAGTTCTTGAAAAAAGGGTGAAACAGTTAACCATGCATGATATACACCAGAAAAAGGTTGATCTGTTGATAGCAGAACCTTTCTATGTAGGGCATGATGGCATGCTTCCATGGCAGAACCTGCGGTTTTGGAAGGATCGTACAACACTTAATGATATCCTCTCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGAGCATGTGCCATCTCTCTTCCTGATCTTTGGAAAAGTCGTTGTTGCTTGAGTAATGTTGAAGGTTTTGACCATTCAGTTGTAAATGCTACACTGGGGGCCTGCAGTAATCTACCTGAACTAGAAGAGGGTCCTTGCCTGCCTTTTTTTGTCTGGCAGTGTGGAGAATTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTTTCAAAACAAATATGCCTATGTCAAGGAAAATCCCAGGTTAAGTTCACCAAGACCGGGGTATGTCATGGATTTGTGCTGTGGATTGACTGGGTGATGGATTTGCAAAATTCTGTTGTGATATCAACTGGTCCAGATAGGAGATATTGGAAGCAGGGAGTAAAGCTTCTTGGAACACCTAGAACAGTAGGACCTCAAAGATCAAGAAATGTCCAAGCATGTTCTGCAGTTCTGGAAGCTTGTTTCAATCCATTACAGGGGGAACTCAAAATTATACTTGATTTCTTATGA 2187 0.4444 MISVFPKTLIATRFLSRTRPRIHTPKLTAIRTMSSSTQRMFQLKLDPITGNSEWVVIEDNDDGDESFAHNFHQPLLATTSYLDMLNDSPRNTAFRQAIQKTITKPCHVLDIGAGTGLLSMMAARAMGDEGRVTACESYLPMVKLMKKVLRINGMEGRVKVINKRSDELEVGLDIPSRADALVSEILDSELLGEGLIPTLQHAHDNLLVENALTVPYRATTYGQLVESTFLWQLHDLHSIEATVSDGIQLTPPGLDSVLSVKRQQYAMHCNPIQEEIKLLSEPFKIFEFDFWKRPESSGETELCVKATNDGRIHAVVSWWVLQLDREGTIYYSTAPRWISSPTITSPVGWCDHWKQCVWFVPGSGISIFKGEEIHLHATHTETSISYNLDTQVPTSEILNHRCMTGDLQLVLPPERVAIYGDKGWRLSMLKAVQSMLQGRDHPLCLVADDSVFLPLLVAQLSEASHVMSLLPGLKERGLQYLQAAAHANGLSRNCIEVLEKRVKQLTMHDIHQKKVDLLIAEPFYVGHDGMLPWQNLRFWKDRTTLNDILSEDALIIPSKGILRACAISLPDLWKSRCCLSNVEGFDHSVVNATLGACSNLPELEEGPCLPFFVWQCGEFDVLSETFDVMEFDFSKQICLCQGKSQVKFTKTGVCHGFVLWIDWVMDLQNSVVISTGPDRRYWKQGVKLLGTPRTVGPQRSRNVQACSAVLEACFNPLQGELKIILDFL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00558 728 Gene3D - 561 727 - -
Gma05g00558 728 Gene3D Vaccinia Virus protein VP39 408 557 IPR029063 -
Gma05g00558 728 PIRSF Arg_N-mtase 38 727 IPR014644 GO:0006479|GO:0008168
Gma05g00558 728 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 35 669 IPR025799 GO:0016274|GO:0018216
Gma05g00558 728 CDD AdoMet_MTases 108 183 - -
Gma05g00558 728 Gene3D Vaccinia Virus protein VP39 74 216 IPR029063 -
Gma05g00558 728 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 35 669 - -
Gma05g00558 728 Gene3D - 217 402 - -
Gma05g00558 728 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 395 728 IPR025799 GO:0016274|GO:0018216
Gma05g00558 728 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 81 396 IPR029063 -
Gma05g00558 728 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 478 698 IPR029063 -
Gma05g00558 728 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 60 389 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00558 Gma-Chr5 5518158 5524187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00558 81 251 C2H2 Transcription Factor Family AT3G12270 29.947 5.23e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00558 K11438 - gmx:100785846 1487.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00558 05 5518158 5524187 Gma05g00558 05 5518158 5524187 ECH