Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00540 ATGGCGAGTGCGTGGGTGAAATCGTGGCAGTGCAAGTCAAGAGCTTTCGAAGACGTGTACCACCCACACCCCAAAATCCTGAGTGCAAGCTGCAGAAAGACCATGGAAAGCATAAAAGAAATGGTGGAAATACCCAAGCCCAGGCCCAGGCCCAAGCCAAAGACACCCTTGGAGAAACATCCGAGCTCCAAATACCCATCATCAGCCACCAAACCTGAATTCGAAGCACGAACCACCATGACACGTTCCCGAAGCAGCACGACAACGACAACCTCGTCGCGTGGCATCATTGAACTTCCCGAAGGCCACCCTTCGCGCAATGTTGTCGAAATCATCTTCCACACCAGCTGGGGCCCCAAGCCGTTCCCGGGTCGGGTCGAGCTAATTTTCAAGCTGCAGAACGCGCCGCGCACAGTGTCGCGCTTCGAGGAGTTTCGCGAGGCAATGAAGGGGCTCGCCGAGGGCAACGACGGCGAGGAGAACGCGCGGTGCATCGCCGACGGGAACGAGGTCATGCGGTTTCACTGCCTGGGTCCCGCCGGGGACGGTGGGCCCTACGACGCTGGATGTGCATGGTCGTTTCCGGAGAAGAAGGGGGCGGCGATTTGCACGTTTTCTGGCAGCGGCGGCGCGCATGAAACCGCCGGCGGAGGTAGGGGGAGAAGGGCCATGTTGGTTTGTCGGGTTGTAGCGGGTCGGGTCTCAAAGCAACTCGGGTTTCTGGACTCGTTGTTGGACAAGCGAGTCGGGTTCGACTCGGTGAGTAGGGATAACGGCGAGTTGCTAGTTTTTGACTCGCGTGCGGTATTGCCCTGCTTTCTTATTATTTACAGGTTGTAA 840 0.5774 MASAWVKSWQCKSRAFEDVYHPHPKILSASCRKTMESIKEMVEIPKPRPRPKPKTPLEKHPSSKYPSSATKPEFEARTTMTRSRSSTTTTTSSRGIIELPEGHPSRNVVEIIFHTSWGPKPFPGRVELIFKLQNAPRTVSRFEEFREAMKGLAEGNDGEENARCIADGNEVMRFHCLGPAGDGGPYDAGCAWSFPEKKGAAICTFSGSGGAHETAGGGRGRRAMLVCRVVAGRVSKQLGFLDSLLDKRVGFDSVSRDNGELLVFDSRAVLPCFLIIYRL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00540 279 MobiDBLite consensus disorder prediction 41 59 - -
Gma05g00540 279 Gene3D - 94 278 - -
Gma05g00540 279 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 278 - -
Gma05g00540 279 MobiDBLite consensus disorder prediction 61 96 - -
Gma05g00540 279 SUPERFAMILY ADP-ribosylation 96 278 - -
Gma05g00540 279 MobiDBLite consensus disorder prediction 41 100 - -
Gma05g00540 279 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00540 Gma-Chr5 5224125 5224964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00540 21 277 C2H2 Transcription Factor Family AT2G29660 30.619 7.15e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00540 - - gmx:100811674 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00540 05 5224125 5224964 Gma05g00540 05 5224125 5224964 ECH