Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00503 atgtcactacttgttgatgggttaaccaaggtgaatatggataagtggatggatataatcgacatgggatatgttattgcatcaagaagtcaaccacccacagattcctcagtgcatcgcataatttgtgtcggtcacgtctataacaatcattttgttcaggtttatttaaaagactgttgtcctttaccgcctATATCAGCCAGATGGGATTCGGTTGAAGCATGTCGGCCTATAGTTGATGAAGCACCTATGTTTTATCCAAATATTAAGGAGTTTGAAGACACACTTGGTTACATAGCTAAAATTCGCTCCCAAGCTGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGA 360 0.1917 MSLLVDGLTKVNMDKWMDIIDMGYVIASRSQPPTDSSVHRIICVGHVYNNHFVQVYLKDCCPLPPISARWDSVEACRPIVDEAPMFYPNIKEFEDTLGYIAKIRSQAEPYGICRIVPPA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00503 119 ProSiteProfiles JmjN domain profile. 83 119 IPR003349 -
Gma05g00503 119 SMART JmjN_1 82 119 IPR003349 -
Gma05g00503 119 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 66 119 - -
Gma05g00503 119 Pfam jmjN domain 84 117 IPR003349 -
Gma05g00503 119 Gene3D Cupin 68 119 - -
Gma05g00503 119 PANTHER LYSINE-SPECIFIC DEMETHYLASE 66 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00503 Gma-Chr5 4769237 4774837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00503 64 119 JUMONJI Transcription Factor Family AT2G34880 58.929 1.56e-18 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma05g00503 JmjN 6.7e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00503 - - gmx:100804193 137.887