Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00499 ATGAGTTTCCTTCATCTCTTCTTTCATCTCTTTTTGTTGGTTGCAGTTATTCCACAGATAGTTCATGGAAATGCAGAACTAAGAGCTCTGATGGACTTGAAATCTTCTTTGGACCCAAAAGACAAGCTCCTTGGTTCGTGGACCAGTGAAGGTGATCCATGCAGTGGTTCGTTCTTAGGAGTTGTGTGCAACGAGCACAACAAAGTGGCTAATATATCATTGCCAGGAAGAGGTCTTTCTGGCCGTGTCTCTCCTGCTGTGGCTGAACTCAAATGCTTGTCAGGTTTATACTTGCATTACAACCTGATCTCTGGGGACATACCAGGAGAGATTGCAAATCTTAAAGAATTGCTCGATCTTTATCTCAACTTTAATAATCTATCTGGAACCATTCCTTCTGATATCGGGAACATGACTAGCCTCCAAGTGCTGCAGTTAGGCTATAACCAGCTAGAGGGGACCATACCTGAGGAACTGGGTTCATTGAAGCAGCTTAATGTTATTTCTTTGCAACATAACAAATTAACTGGTGAAATTCCTCAAAGCTTGGGTCACTTGGAGAAGCTAAGGAAGCTATATTTGAGCTATAACAACTTCAGTGGCACAATTCCTGTAAAACTAGCTGATGTTGCAAACTTGGAAGTTCTAGATATTCAAAACAATCATCTTTCAGGAACTGTTCCTTCTGCATTGCAGAGATTAAGGGAAGGATTCCAAGGTGCAAACAACCGAGATCTATGTGGAGATGACTTTTCTGCTTTGAAAACTTGCAACAAAGATAGAATATTTGGCGTTAGTCAGATTAGTGCCCCAAATATATCCATAGACAGAAATCCTCCAATAACATTCCCGAAGCCTGTAAATGCCCACTTGCATTGTAACCAGACCCATTGCTCAAAGTCAAGAAGCTTTCTTCTTCTTGTCATTGCAGCAAGTGTTACAACTACTGTTATCACATTAATAAGTTCTGGAATTTTCATATTTGTCAGATACCGGCGCCAAAGGCAGAAGGTTAGGAACCCATCAGATTATTCTGAAGGCCAACATAGTCCTTACCAGCCTAAAGAGTTCTACAGAAGTTCATCTCCACTTGTTAATCTTGAGCATTATTATACTGGTTGGGATTCATTGGCTGATGGTCATAATGAGAGTGGATTATCCCTTGAATATTTGAACCGTTTTAGATTTAATATTGATGAGATTGAATCAGCATCAGGGCACCTTTCTGAGGCCAATTTATTGAGTAAGAGCAAATTCTCAGCTGTCTATAAAGGAATTCTTAGAGACGGTTCTCTTGTGGCTATTAGGAGTATTAGTGTGACTTGCTGCAAAGCCGAGGAAGGTGAATTTTTGAAGGGTTTGAGCCTGTTAACCTCACTGAGACATGAAAATATTGTTAAGATGAGAGGCTTCTGTTGCTCAAGGAGTAGAGGTGAATGGTTTTTTGTCTGTGACTTTGCCACTAGGGGTAATCTGTCTCAATATCTTGACAAGGAAGATGGAAGTGCCCATGTAATTGAATGGTCCAAGAGAGTTTCTATTATCAGGGGCATTGCAAAAGGTATTGGTTATTTGCACAGCAATGAAGCAAGCAAGCCTACAATAGTACACCAAAACATTTCAGTAGAAAAAGTTATTCTAGACCATGAATTTAACCCCTTGATCACAGATGCCGGCCTCCCTAAGCTTCTTGCAGATGATGTTGTCTTCTCAGCTCTTAAAGCAAGTGCTGCCATGGGATATCTAGCTCCCGAATACCTTACCACTGGACGCTTTACTGAGAAGAGTGACATATATGCATTTGGGGTTATTGTTCTTCAAGTTCTATCCGGAAAGGTATTGATGGGGGGTACAATCCGGGTGGCAGTTGAAGCTTTCAGATTTGAAGATTTTGTTGACACAAATCTGAAGGGAGATTATTCTAAATCTGAAGCCGCAATTCTTTCAAAGCTTGCAATTCAGTGCACTCTTGAAGTGCCAGAGCAAAGACCAACCATGGTGGAGGTGATTCAAGAGCTGACCATGCTTCCTAATCCTTCACATTCTTCATAA 2052 0.4094 MSFLHLFFHLFLLVAVIPQIVHGNAELRALMDLKSSLDPKDKLLGSWTSEGDPCSGSFLGVVCNEHNKVANISLPGRGLSGRVSPAVAELKCLSGLYLHYNLISGDIPGEIANLKELLDLYLNFNNLSGTIPSDIGNMTSLQVLQLGYNQLEGTIPEELGSLKQLNVISLQHNKLTGEIPQSLGHLEKLRKLYLSYNNFSGTIPVKLADVANLEVLDIQNNHLSGTVPSALQRLREGFQGANNRDLCGDDFSALKTCNKDRIFGVSQISAPNISIDRNPPITFPKPVNAHLHCNQTHCSKSRSFLLLVIAASVTTTVITLISSGIFIFVRYRRQRQKVRNPSDYSEGQHSPYQPKEFYRSSSPLVNLEHYYTGWDSLADGHNESGLSLEYLNRFRFNIDEIESASGHLSEANLLSKSKFSAVYKGILRDGSLVAIRSISVTCCKAEEGEFLKGLSLLTSLRHENIVKMRGFCCSRSRGEWFFVCDFATRGNLSQYLDKEDGSAHVIEWSKRVSIIRGIAKGIGYLHSNEASKPTIVHQNISVEKVILDHEFNPLITDAGLPKLLADDVVFSALKASAAMGYLAPEYLTTGRFTEKSDIYAFGVIVLQVLSGKVLMGGTIRVAVEAFRFEDFVDTNLKGDYSKSEAAILSKLAIQCTLEVPEQRPTMVEVIQELTMLPNPSHSS 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00499 683 PANTHER OS01G0253100 PROTEIN 19 674 IPR045271 GO:0004714|GO:0006468
Gma05g00499 683 SUPERFAMILY Protein kinase-like (PK-like) 384 677 IPR011009 -
Gma05g00499 683 Pfam Protein tyrosine and serine/threonine kinase 412 673 IPR001245 GO:0004672|GO:0006468
Gma05g00499 683 SMART LRR_typ_2 114 137 IPR003591 -
Gma05g00499 683 SMART LRR_typ_2 138 162 IPR003591 -
Gma05g00499 683 SMART LRR_typ_2 210 233 IPR003591 -
Gma05g00499 683 SMART LRR_typ_2 186 209 IPR003591 -
Gma05g00499 683 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Gma05g00499 683 Gene3D Ribonuclease Inhibitor 23 172 IPR032675 -
Gma05g00499 683 ProSiteProfiles Protein kinase domain profile. 408 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00499 683 Pfam Leucine Rich Repeat 212 234 IPR001611 GO:0005515
Gma05g00499 683 Gene3D Ribonuclease Inhibitor 173 247 IPR032675 -
Gma05g00499 683 SUPERFAMILY L domain-like 26 234 - -
Gma05g00499 683 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Gma05g00499 683 Gene3D Transferase(Phosphotransferase) domain 1 488 677 - -
Gma05g00499 683 PANTHER LEUCINE RICH REPEAT RECEPTOR KINASE 19 674 - -
Gma05g00499 683 Gene3D Phosphorylase Kinase; domain 1 375 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00499 Gma-Chr5 4740226 4743532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00499 10 521 Miscellaneous Gene Families AT4G22730 55.048 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Gma05g00499 PK_Tyr_Ser-Thr 2.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00499 - - gmx:100779591 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01253 17 11062241 11066029 Gma05g00499 05 4740226 4743532 GST