Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00481 ATGATTCCCTTAAAGAGGAATTTGTCCTGCAAGATCCAGCCCCGCACCCACGACAATCAGCTCTCCTACGTCGTCGGCGACACCACGATCCTCGCCGTCGACCGCTCTGTTATGTTCCCCGCCTTCCTCTCCAAGCTCGCCGGCGAAGACCTCGACGCTCTCATCTCCGTCACCAACGACGACGACCTCGAACACATGATGCTCGAATACGAGAGACTCTATCGCCCTAACCTAAAACCTATTAGAATGAGACTCTTCCTTTTCACACTCTCTAATTAA 279 0.5269 MIPLKRNLSCKIQPRTHDNQLSYVVGDTTILAVDRSVMFPAFLSKLAGEDLDALISVTNDDDLEHMMLEYERLYRPNLKPIRMRLFLFTLSN 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00481 92 SMART PB1_new 16 88 IPR000270 GO:0005515
Gma05g00481 92 Pfam PB1 domain 42 88 IPR000270 GO:0005515
Gma05g00481 92 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 8 92 - -
Gma05g00481 92 SUPERFAMILY CAD & PB1 domains 17 89 - -
Gma05g00481 92 PANTHER OS05G0427100 PROTEIN-RELATED 8 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00481 Gma-Chr5 4569829 4570107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00481 12 89 MAP Kinase Kinase Kinase AT5G57610 39.130 2.76e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00481 - - gmx:100820420 140.969