Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00472 ATGGCTTCTAGTGGTGCCACACCTCTGTGTAATAATCATTCTCTAATACATCTCCCAAAACGCTCCGTTTTGCTGAAGGACTACCTGAGGGATGACCTCAGTTCGTGTTCAACGAACGGTTTCAAATCGTTCCCGCGCCGACAATGCTGCACCACCGTGGGATTCTTCGGGGAGAAAGATCTCCAGCTCCAACGCAAAAGAAGGAGCACGCTCCCTCGACGACGATCCACAACCATATCGGCCTTGCAGAGAGCTTCTGGAGCAGTAATCAACGCGATAAAGTCACTGCCGCCGTTGTCACAAAAGAGTGGTAAAGCGAAGAAAGGTGTTGCCGGTGTTCTTTGTAGAAGCTTCTCGAGGAAGGTTTTGAGTAGAAGATTCTGGAGGAAAGCGGCGGCGAGGGAAGAGGGAAACGAAGATGTGCCGCGGAGGAGGAGATCTTTCCATGAACTCATCATGCTGGATCATGAGGAGCATCGTAAAGCGACGTCGTTGAATGAGGATAGTACTACCGTGTTCGCTGCGCATGCCCCGAGCGTGACCACCTCTTCCGCTTGTGGCAGTGAAAGCTGGGGAGACAGCGAGTTCACTTTTACATCTGCCGGTGCTTCTTCTTCCTCTGAGAGCTCCAACGAGAATTACCTCGTACTTGAGGGTACCGAAGAGGGTGCGCCCCATCACAAGGTGGAAGAAGTAGTAACTAAGGAATATTGGCCGAATGATGAGAAGGAACAATTTAGTCCTGAATCAATACTAGATTGCCCGTTTGAAGATGAAGAAGATATTTACAAGTCTCAAATCAATTCCACTTCCATTACTCTTTCCTTTTCTCAAGGAAGGAAACACAAGCATATGCACAAAAGATGCCATTTTGAAAGTGTGGTTCCACTGGAGCCAGTGGTTTTAGAGAAAATGTTCGCGCGGTTAGAGCTGGAGGATGAACCACACAACCATTATACAAAACAATGTTCCCGCTTATTAGTGCCAAAAGTGCGTGCCCAAAACAACTTGCGTCGTGACAACAATCACAACCATGAGGACAATGCTCGTGATCTTCTCAACTTCGTTAAAAGGTCAATTACACCCAACAGTTTGATAACAAAGGCAGAGAACCTGCTGTTTGATTACTTCAAGCAGAGTATTGAGGAAAACAAAGACATTGATTATTCAAAGAAGCTTCAAATTTGCAAGGTAGCTGAAGATTGGATAAATGGACAACCCCAAGAAATGTATTTGGGTTGGGAAGTGCAAGGAGGAAGGTGTGTCTACATTAGGGAGATGGATAAGTGTGAGGAGTGGAAGAGCTCTGATCAAGACATACAACAATTGGGTCAGGAGCTGGCAAACGAGGTGTTCACTAATTTGGTGAATGAGTTCACACTTGAACTCACGTCATGTGCTAGCCACTAA 1410 0.4645 MASSGATPLCNNHSLIHLPKRSVLLKDYLRDDLSSCSTNGFKSFPRRQCCTTVGFFGEKDLQLQRKRRSTLPRRRSTTISALQRASGAVINAIKSLPPLSQKSGKAKKGVAGVLCRSFSRKVLSRRFWRKAAAREEGNEDVPRRRRSFHELIMLDHEEHRKATSLNEDSTTVFAAHAPSVTTSSACGSESWGDSEFTFTSAGASSSSESSNENYLVLEGTEEGAPHHKVEEVVTKEYWPNDEKEQFSPESILDCPFEDEEDIYKSQINSTSITLSFSQGRKHKHMHKRCHFESVVPLEPVVLEKMFARLELEDEPHNHYTKQCSRLLVPKVRAQNNLRRDNNHNHEDNARDLLNFVKRSITPNSLITKAENLLFDYFKQSIEENKDIDYSKKLQICKVAEDWINGQPQEMYLGWEVQGGRCVYIREMDKCEEWKSSDQDIQQLGQELANEVFTNLVNEFTLELTSCASH 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00472 469 PANTHER OS04G0572500 PROTEIN 17 463 - -
Gma05g00472 469 PANTHER OS04G0572500 PROTEIN 17 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00472 Gma-Chr5 4491038 4493621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00472 21 464 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 28.631 5.13e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00472 - - gmx:102663212 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00472 05 4491038 4493621 Gma05g00472 05 4491038 4493621 ECH
Gma17g01226 17 10796505 10799801 Gma05g00472 05 4491038 4493621 GST