Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00464 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGGCACAGATTGAGGAGCGAAGCATCAGCACAGTTTCAAGCCTGCCACTTCCAGCTACCTTCTTCCATGAGCACGCAGAGATTGGACCTGCCATGCACCACCACCACCTTCACTCGCAACAACAAAGACACCACCTCTTCACGCTCTGTTCTTTCAGTGGATCAGAAACCAATCGAAGCCAAGACCAGCACCTGTTCTCTCAAGCAACACATTCGACTCCCACCTCTGGCCATCACTGCAGCACCATCACCATTGGTGGAAGACTCCATCATCAAAGACAACACCAACAACAACAAGAGTTTGAAGAGGCTCGCGGCGGAGCACCAAGACGATTCCTTCACCAACAACATAGCCAAGAGGAAGAAAAAGAGTAGCAGCACTGAGTGTGATTGGTTTCAGCCTGATGTTGTTGGGACTACTTTAGGAGGATTTAACAATAACAACAATAACAACAACACTTCACTTGCTTCTTTCTCTTCAGAGGAAGACAGGGTTTGTTTTGTTCCTTCTGAAGTGGTTTCTCATTCTGCTCCTTTCCCTTTAAACCCTTGGCTGGAATCATGTGTTACAAAGATCACAAATTTCGGCGAGGGTAGCCAACGCCCTCACCACCACCACCACAGCGACCATGCCTCAGGCTCAGTCTCCAACGCTTCCTCGGAGAGCCAGAGCCTGAGGCTAAACGACAACATTTCAGAACACGAAGTGGGAAACGGTTCAGGGAACCCTTATTATCACCACGAGGTGGATACAGGGGAAGAAGACAACCACCACGGGTTCGAGCTCGTGAGTTTGCTCACCGGCTGCGTCGACGCCATTGGATCGAGAAACGTCACTGCAATCAACCACTTCATAGCAAAACTGGGTGATCTTGCTTCCCCCAAAGGAACAACCTCCATAAGCCGAATTTGTGCTTACTTCACAGAAGCATTAGCCATCAGAGTCACGAGGCTCTGGCCTCACGTTTTCCACATCACCACCACAAGCACTTCTCGCGACATGGTGGAGGACGATGAATCCGCTACTGCTCTGAGACTTCTCAACCAAGTAACCCCAATTCCCAAGTTCCTTCATTTCACATCAAACGAGATGTTGCTGAGGGCTTTTGAAGGCAAAGACAGGGTTCACATAATAGACTTCGACATCAAGCAAGGCCTTCAATGGTCAGGTTTGTTCCAAAGCCTAGCTTCGAGGTCCAACCCTCCGACCCACGTGAGAATCACTGGGATCGGAGAGTCAAAACAGGACCTCAACGAAACTGGCGAGAGGCTCGCCGGTTTCGCTGAGGCCTTAAACCTGCCCTTCGAGTTCCACCCTGTGGTGGACAGACTCGAGGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCACGAAACGGTGGCTGTGAACTGCGTTTTGCAGCTTCACAAGACACTCTACGACGGAAGCGGAGGAGCCTTGAGGGACTTCTTGGGTCTAATCCGCAGCACAAATCCCAGCGTTATCGTGGTGGCAGAGCAAGAAGCAGAACATAACGAAAACAGGTTGGAGGGAAGGGTGTGTAACTCGTTGAAATACTACTCGGCATTGTTTGATTCCATTGACGAGAGTGGGCTTCCGCAAGAGAGTGCGGTGAGGGTGAAAATAGAAGAGATGTATGCTAAGGAGATAAGGAACATTGTTGCTTGCGAAGGAAGGGAGAGGGTGGAGAGGCACGAGAGTTTCGGGAACTGGAGGAGGATGATGGTGGAGCAAGGAGGGTTCAGATGCATGGGTGTTACTGAAAGAGAATTGAGCCAGAGCCAGATGCTGTTGAAGATGTATTCTTGCGAGAGTTACAGTGTGAAGAAACAAGAGAAGGAAGGAGCAACAGGAGTTACACTTAGTTGGTTAGAGCAACCTTTGTACACTGTCTCTGCTTGGGGGCCTGTTGATGCTGCTGCGGGTACCTCGTCCTCGTTTTCTCAGCCAAGTTGA 1995 0.5028 MLAGCSSSTLLSPRHRLRSEASAQFQACHFQLPSSMSTQRLDLPCTTTTFTRNNKDTTSSRSVLSVDQKPIEAKTSTCSLKQHIRLPPLAITAAPSPLVEDSIIKDNTNNNKSLKRLAAEHQDDSFTNNIAKRKKKSSSTECDWFQPDVVGTTLGGFNNNNNNNNTSLASFSSEEDRVCFVPSEVVSHSAPFPLNPWLESCVTKITNFGEGSQRPHHHHHSDHASGSVSNASSESQSLRLNDNISEHEVGNGSGNPYYHHEVDTGEEDNHHGFELVSLLTGCVDAIGSRNVTAINHFIAKLGDLASPKGTTSISRICAYFTEALAIRVTRLWPHVFHITTTSTSRDMVEDDESATALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWSGLFQSLASRSNPPTHVRITGIGESKQDLNETGERLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPSVIVVAEQEAEHNENRLEGRVCNSLKYYSALFDSIDESGLPQESAVRVKIEEMYAKEIRNIVACEGRERVERHESFGNWRRMMVEQGGFRCMGVTERELSQSQMLLKMYSCESYSVKKQEKEGATGVTLSWLEQPLYTVSAWGPVDAAAGTSSSFSQPS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00464 664 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 652 IPR005202 -
Gma05g00464 664 PANTHER SCARECROW-LIKE PROTEIN 28 6 652 IPR030027 -
Gma05g00464 664 MobiDBLite consensus disorder prediction 209 238 - -
Gma05g00464 664 Pfam GRAS domain family 275 647 IPR005202 -
Gma05g00464 664 ProSiteProfiles GRAS family profile. 266 648 IPR005202 -
Gma05g00464 664 Coils Coil 104 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00464 Gma-Chr5 4422897 4424891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00464 1 647 GRAS Transcription Factor Family AT1G63100 55.217 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma05g00464 GRAS 6.3e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00464 - - gmx:100786173 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01219 17 10710244 10715571 Gma05g00464 05 4422897 4424891 GST