Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00461 ATGGGTAAGGCAACAAAGTGGTTTCGCGGGTTTTTCGGTCTCAAAAAAACAGAGTACACTGCCCCACCCGCCAAGCCTCCCAAAGAGAAACGCCGATGGAGCTTCGTTAAATCATACACTGAAAAAGACAACACCACTGCCGCCACGTGTCCACCACAAAGAAACAACAACAACCACGCCATGGCAGTAGCAGCAGCCACCGCTGCCGTGGCGGAAGCGGCGGTGGCTGCCGCCGAAGCCGCAGCCGTCGTGGTGAGACTAACAAGCAGCAGCGGTAGGTGCGCCGACGCTGGACCCACCAGGATTCGACAACATTGGGCTGCTGTTAGGATCCAAGCCGCTTTTCGAGGATGTTTGGCAAGGAGAGCACTGCGAGCATTAAAGGGATTGGTGAAGTTGCAGGCATTGGTGAGAGGTCACATTGAGAGGAAGCGCACAGCGGAGTGGCTGAAAAGAGTGCAAGTACTCTTACATGCACAGCCACAAGTTTCTGCAGGGTTGATCCTGCATGCCTCACCTTCGGGTTCAAAGTTATCTAGCCACCTCCATGGTCCAGAAACACCCGAAAAATTTGAAAGCCCTATCAGATCTAAGAGCATGAAACATGAGCACTCACCTATACTCAAGAGAAATGGCTCCAAATCCTGTGTCCAGATCAATGGCTATCAAGAGATGTGTGGGAGTAGATCAGAGAGTCAAGTGAATGAACAATCATGGAACTCAGGAAGATCATTGAATAGAACATACAGCTCCAATGATGAAAGAAATGACAGAGTTCTTGAAGTTGATTCTGGAAAACCACACTTCACAATAAAGCGCAGAAATCTCTCTTTCTCCACAGGTTCTGATCTTTATAGTAAGAGTTTGAACAGCACAAAGGAATCAACATCTCTTCAATCTGGTCAAAGTTCATGCTGTGAGGTTCAGTCTCACAGTTACACCTCACAAAAAGTGAATGAGGTTGAGGAGAGTCCATTCTGCACTGCTGACAATAGTCCACAATATTTATCTGCCACTTCTAAAGATGGTGGCTTCAAAAGAAGCCCTTTTACTCCTACTAAGAGTGATGGCTCTAGAAGCTACATTCGTGGTTACCCTGATTATCCAAGTTACATGGCATGCACTGAATCTTCAAAGGCAAAGGCCAGATCTCTGAGTGCACCAAAACAAAGACCTCAAAGTGAGAAGTCTGGTTCATCTAATAGATACTCACTTAATGGATTTGATATGTCAAGATTGGCCACACAAAGGGCAATGCAAGCAAGCTTCACCAACAAAGCATATCCAGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCTGTGGGATACAGATTCTGA 1338 0.4694 MGKATKWFRGFFGLKKTEYTAPPAKPPKEKRRWSFVKSYTEKDNTTAATCPPQRNNNNHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSSSGRCADAGPTRIRQHWAAVRIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAEWLKRVQVLLHAQPQVSAGLILHASPSGSKLSSHLHGPETPEKFESPIRSKSMKHEHSPILKRNGSKSCVQINGYQEMCGSRSESQVNEQSWNSGRSLNRTYSSNDERNDRVLEVDSGKPHFTIKRRNLSFSTGSDLYSKSLNSTKESTSLQSGQSSCCEVQSHSYTSQKVNEVEESPFCTADNSPQYLSATSKDGGFKRSPFTPTKSDGSRSYIRGYPDYPSYMACTESSKAKARSLSAPKQRPQSEKSGSSNRYSLNGFDMSRLATQRAMQASFTNKAYPGSGRLDKLGMPVGYRF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00461 445 MobiDBLite consensus disorder prediction 233 249 - -
Gma05g00461 445 Pfam IQ calmodulin-binding motif 105 125 IPR000048 GO:0005515
Gma05g00461 445 Pfam IQ calmodulin-binding motif 131 145 IPR000048 GO:0005515
Gma05g00461 445 ProSiteProfiles IQ motif profile. 128 154 IPR000048 GO:0005515
Gma05g00461 445 PANTHER IQ-DOMAIN 5-RELATED 1 440 - -
Gma05g00461 445 MobiDBLite consensus disorder prediction 233 261 - -
Gma05g00461 445 Gene3D - 102 154 - -
Gma05g00461 445 MobiDBLite consensus disorder prediction 183 207 - -
Gma05g00461 445 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 440 - -
Gma05g00461 445 MobiDBLite consensus disorder prediction 379 406 - -
Gma05g00461 445 MobiDBLite consensus disorder prediction 338 359 - -
Gma05g00461 445 Pfam Protein of unknown function (DUF4005) 333 410 IPR025064 -
Gma05g00461 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 153 IPR027417 -
Gma05g00461 445 MobiDBLite consensus disorder prediction 338 358 - -
Gma05g00461 445 MobiDBLite consensus disorder prediction 174 207 - -
Gma05g00461 445 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00461 Gma-Chr5 4381589 4384694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00461 1 445 IQD Protein Family AT4G23060 40.755 1.96e-68 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00461 - - gmx:100793587 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01216 17 10678628 10682741 Gma05g00461 05 4381589 4384694 GST
Gma05g00461 05 4381589 4384694 Gma01g02177 01 57062815 57065915 PCT