Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00452 ATGAAGGGTGAGGACCCATCCCAAAACGGTGGCGTGGAATCTGTCAAGCAGAAGATAAATTTCACTGCAACAGGGTCCTTCCATGCAGTTGCCAACGACATAACAGTAGTGGCTTCTGGAGGAAATTCAGGACCTTCTCCTGGAACTGTATCCAACAACGAACCTTGGATGCTCACAGTTGCAGCAAGCACAATTGATAGAGACTTCGCTGGTTATGTTACACTTGGCGACAAGAAAATTATCAAGGCTACAACAGTTCCCAGCTTGTTCTACGGCAAGCCTTACACCTGTCCAAAGTCGTTCAGTTTAGCAGATTTCAATTATCCAGCAATCACAATTCCTCAGTTAGACCCTGGACATTCTCTGAATGTTACTCGAACTGTTACCAATGTTGGGTCTCCAAGAACGTATAGAGTGCACATCAAGGCACCACCACAAGTTGTAGTTACGGTCGAGCCTAGGAAACTGAGGTTCAAGAAAAAGGGTGAAAGAAAGGAGTTGAGAGTTACCTTGACCTTGAAGCCGCAAACTAAGAACACCACTGATTATGTTTTCGGGTGGTTGACGTGGACTGATCACAAGCACCATGTCAGGAGTCCCATTGCAGTCAAAATAGCACATTAA 624 0.4535 MKGEDPSQNGGVESVKQKINFTATGSFHAVANDITVVASGGNSGPSPGTVSNNEPWMLTVAASTIDRDFAGYVTLGDKKIIKATTVPSLFYGKPYTCPKSFSLADFNYPAITIPQLDPGHSLNVTRTVTNVGSPRTYRVHIKAPPQVVVTVEPRKLRFKKKGERKELRVTLTLKPQTKNTTDYVFGWLTWTDHKHHVRSPIAVKIAH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00452 207 Pfam Fibronectin type-III domain 105 203 IPR041469 -
Gma05g00452 207 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 22 81 - -
Gma05g00452 207 PANTHER PEPTIDASE S8 22 81 - -
Gma05g00452 207 PANTHER PEPTIDASE S8 88 204 - -
Gma05g00452 207 Gene3D - 78 206 - -
Gma05g00452 207 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 88 204 - -
Gma05g00452 207 SUPERFAMILY Subtilisin-like 19 109 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00452 Gma-Chr5 4295402 4297967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00452 85 206 Subtilisin-like Serine Gene Family AT5G59810 47.967 1.22e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00452 - - gmx:106798704 252.292