Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00451 ATGGCGTCTTTGCAGCACCCCACAGCTTCCCTCCAATCCAAACACGTCCTAATCCCCCGAAACACTCTTACCCAGAAACCCATCCTCAACCTCTCCTCCCTCCCGGGCACCACCTTCACCCCCCTCAAGCTCAAATTCTTCAGCGGCGGCGCCGTCCGCCGCTCCACCGGCGCCTCGGGAGCCAGAATGTCAGCCACCGCAGCCTCCAGCTACGCGGCTGCCCTGGCCGACGTGGCTGCCGCGAACAACACGCTCGACGCGACAACCGCGGACATCGAGAAAATCGACGAGATATTCTCGGAGGCGCAGGTGTCGGACTACTTCGCCAACCCCACCTTGGCCGTGGAGAAGAAGCGGAAGCTGATAGATGAGATTGCGGAATCTTCGGGGTTCCAGCCCCACACGAGAAACTTCCTCTACATCCTCGTGGACGCGCAGAGGATCGACCTCATCAACGAGATCGCAAAAGAGTTCGAATTGGTTTACAATTCCTTGACCGACACGGAGCTGGCGGTGGTGACGTCGGTGGTGAAGCTGGAGTCGCAGCACCTGGCGCAGATCGCGAAGCAGGTTCAGAAGCTCACTGGGACGAAGAACGTGAGGATTAAGACGCTACTTGACCCTAGTTTGGTCGCGGGTTTCACTGTCAGTGAAATTTATCTTCTGCTTGACAGATTCCACGCCACCGTTTTGGGATGGGTCCTCACCCTTCATCACTAA 720 0.5778 MASLQHPTASLQSKHVLIPRNTLTQKPILNLSSLPGTTFTPLKLKFFSGGAVRRSTGASGARMSATAASSYAAALADVAAANNTLDATTADIEKIDEIFSEAQVSDYFANPTLAVEKKRKLIDEIAESSGFQPHTRNFLYILVDAQRIDLINEIAKEFELVYNSLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGTKNVRIKTLLDPSLVAGFTVSEIYLLLDRFHATVLGWVLTLHH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00451 239 Pfam ATP synthase delta (OSCP) subunit 68 216 IPR000711 GO:0015986|GO:0046933
Gma05g00451 239 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 166 IPR026015 -
Gma05g00451 239 Hamap ATP synthase subunit delta [atpD]. 63 232 IPR000711 GO:0015986|GO:0046933
Gma05g00451 239 Gene3D - 67 159 IPR026015 -
Gma05g00451 239 PANTHER ATP SYNTHASE DELTA CHAIN 54 216 IPR000711 GO:0015986|GO:0046933
Gma05g00451 239 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
Gma05g00451 239 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Gma05g00451 239 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Gma05g00451 239 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Gma05g00451 239 PANTHER BNACNNG66500D PROTEIN 54 216 - -
Gma05g00451 239 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 68 217 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00451 Gma-Chr5 4295082 4299242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00451 1 216 Primary Pumps ATPases AT4G09650 58.333 2.14e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00451 K02113 - gmx:100815063 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01207 17 10617929 10619107 Gma05g00451 05 4295082 4299242 GST