Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma05g00445 | ATGGTTTCGACGAGACGCAGTGGATCTGTCTCTGCCAAAAGATCTTCCTCCTCGGAAGATAAACCTCCTTCGCCGAAGCGCCAAAAGGTCGACAATGGCGGTTCGTCGGAGAAACCGGTGCCGACGCCGGCGGAAAATTCCAAGGACTTATCTACTCCGGAGCCCGTGCTTGATCCCGGAGAATGTGGCTCCGGCGAAGCTCAGATCGCCGGCGCGGTTGCCGACGATGGAGTGAGCTCCGGCAAGGGTGACGCTACGCCGGCTGTGCCTGTCACGGCGCCGATTGCTGATGCCGCATGTCCGTCGTTCTCTTCGTGGATTAATTATCAGAAACAAAATCCGAATATCGAAGGTGCGCCGTGGTGCAGGTTCTTGTCGCAGTCTGCACAGAATCCTAATGTTGCTATTTGCACACCCAATTTCACGATTGGTTCTAATAGAGGTTGCAACTTTCCACTGAATGATCAAACTATAAGTGGGAATTTATGCAGGATCAAACATACACAGGGCGATGGGAGTGCTGTAGCTGTGCTAGAAAGTATGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACGCATGTCAAGAGGAATACCAGCTGTGTACTTACCTCGGGTGATGAAGTGGTTTTTGGTGTGCTTGGAAATCATTCTTATATTTTCCAGCAACTAAATACCGAGGTTGCTGTTAGGGGTGCAGAAGCTCAAAGTGGTATTGGGAAATTTCTGCCACTTGAAAGGAGAAGTGGAGACCCCTCAGCTGTGGATGGGGCCTCTATTTTGGCTTCTCTTTCCAACAGACAGGACCTTACAAGATGGAAATCTCCATCTCAGACCTCCAGTAAACCTCACCAGGGTACCGATGTCTCTAGTCGTACTGTTCATCATAATTGTACAGAAACTGAGCTTGATGGCTCAGAATCAACTCCAAATGTGCGGAGTGATAAAGCAGCAGATGTTCAAACAAGTGATAATAATTCAACAATGGATTGCAATCCAGATGCTGGTGCAGAGGCAGGCAATGCTAAAATCTATGGGGTATTGGAAGAAAGAAATGGGACACTGGATATGCAGGCTGCATCGACTTTGGGTACATCTGTGCGCTGTGCAGTGTTTAAAGAAGATGTAAATGCTGCGATACTGGATGGAAAAGAAATAGATGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAATACAAAAAATGTCCTGGTGGCTGCTTGCTTTATGCACCTCATGCATAAAGAACATGAAAAGTTTACTGCAGATCTTACAACCATAAACCCTCGTATTCTACTCTCTGGACCTGCAGGGTCTGAAATATATCAGGAGATGTTGGTAAAAGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGTCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGCTACTCAAAGATGGACTTAATGCTGAAAAATCCTTCCGCTGCACTAAACTAAGTCCTACAGAAGACATGGCTAGGATCATGGATCCATTAGCTAGCGAAACAGAGACACCTAGCCCTTCAAATGCACCTACATCATATGGCTTTGAGTCTCAACCTAAGTTGGAAACCGATAACACGCCATCCACCTCTGGGACAGCTAAAAGTTGCTCATTCAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGCGTATATCAGACATCTCCAAGGGGACCGTCTAATGGAAGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAACCCATACCTGATGGAGTTGATCTTGGTGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCACCGATCTTCGTTTGGAAAGCAGTGCTGTAGAAGAACTGGACAAATTACTTATTCATTCATTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAGTGCACCATTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAATGGAGATTCACATTCATTTAAAAGTAAGCTTGAAAATCTTCCGGATAATGTGGTCGTAATAGGTTCACACACACAAAATGACAGTCGCAAGGAAAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCAgatagttttggacgattgcatgacagggggaaggaagtcccgaaacaaaatagaactttgaccaagcttttcccaaataaaattacaattcacatgccacaggatgaggctcttctagcatcttggaagcagcaactggatcgagatgttgagactctcaaaatcaaaggaaatttacatcacctgcgcacaGTTTTGGGACGTTGTGGAATGGAATGTGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGCCACCACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCAAAGCTTGCATTGTCCTGTGAGAGCATTCAGTATGGAATTGGGATCTTGCAGTCTATCCAGAATGAGTCTAAGAGCCTGAAGAAATCTCTTAAGGATGTTGTGACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATCGATGTTACTTTTGATGATATTGGAGCTCTTGAAAAGGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAACTTTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAAGGAATCCTATTATTTGGTCCCCCTGGAACTGGTAAAACAATGCTCGCAAAGGCAATAGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGTATTACCTCTAAGTGGTTTGGGGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTCTGGCGAGTAAAATTTCACCTAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGTAGGGAAAACCCAGGAGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGCACGAAGGAAACAGAGCGAGTTCTTGTGCTGGCAGCCACTAACAGGCCTTTTGACCTTGACGAGGCTGTCATAAGGAGGATGCCAAGAAGATTGATGGTAAATTTGCCAGATGCTCCTAATAGAGCGAAAATATTGAAAGTTATCCTGGCAAAAGAGGAATTGTCTCCTGATGTTGATTTAGATGCAGTAGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCAGCACATCGGCCTATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACGTGCTGCTGCTCTAGCAGAAGGCCAACCAGCTCCAGCATTATGCAGCAGTGGGGACGTTAGATCTTTAAACATGGAAGACTTTAAATATGCTCATCAGCAGGTATGTGCAAGTGTTTCTTCTGAATCAGTAAATATGACTGAGCTTTTACAATGGAATGAATTATATGGAGAAGGGGGTTCAAGAGTAAAGAAAGCACTCAGCTATTTCATGTGA | 3591 | 0.4127 | MVSTRRSGSVSAKRSSSSEDKPPSPKRQKVDNGGSSEKPVPTPAENSKDLSTPEPVLDPGECGSGEAQIAGAVADDGVSSGKGDATPAVPVTAPIADAACPSFSSWINYQKQNPNIEGAPWCRFLSQSAQNPNVAICTPNFTIGSNRGCNFPLNDQTISGNLCRIKHTQGDGSAVAVLESMGSKGSVLVNGTHVKRNTSCVLTSGDEVVFGVLGNHSYIFQQLNTEVAVRGAEAQSGIGKFLPLERRSGDPSAVDGASILASLSNRQDLTRWKSPSQTSSKPHQGTDVSSRTVHHNCTETELDGSESTPNVRSDKAADVQTSDNNSTMDCNPDAGAEAGNAKIYGVLEERNGTLDMQAASTLGTSVRCAVFKEDVNAAILDGKEIDVSFDNFPYYLSENTKNVLVAACFMHLMHKEHEKFTADLTTINPRILLSGPAGSEIYQEMLVKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFRCTKLSPTEDMARIMDPLASETETPSPSNAPTSYGFESQPKLETDNTPSTSGTAKSCSFKLGDRVKFSCSSSCGVYQTSPRGPSNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGACEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVVFSESRSAPFILFMKDAEKSIVGNGDSHSFKSKLENLPDNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKQNRTLTKLFPNKITIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRTVLGRCGMECEGLETLCIKDQTLTNENAEKIIGWALSHHLMQNSEAKPDSKLALSCESIQYGIGILQSIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAKEELSPDVDLDAVASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALAEGQPAPALCSSGDVRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNELYGEGGSRVKKALSYFM | 1196 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma05g00445 | 1196 | Gene3D | - | 890 | 1171 | IPR027417 | - | |
Gma05g00445 | 1196 | PANTHER | ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 | 76 | 1196 | - | - | |
Gma05g00445 | 1196 | ProSitePatterns | AAA-protein family signature. | 1035 | 1054 | IPR003960 | GO:0005524|GO:0016887 | |
Gma05g00445 | 1196 | MobiDBLite | consensus disorder prediction | 268 | 293 | - | - | |
Gma05g00445 | 1196 | MobiDBLite | consensus disorder prediction | 302 | 331 | - | - | |
Gma05g00445 | 1196 | Pfam | FHA domain | 142 | 211 | IPR000253 | GO:0005515 | |
Gma05g00445 | 1196 | Pfam | ATPase family associated with various cellular activities (AAA) | 932 | 1061 | IPR003959 | GO:0005524|GO:0016887 | |
Gma05g00445 | 1196 | SMART | AAA_5 | 928 | 1065 | IPR003593 | - | |
Gma05g00445 | 1196 | MobiDBLite | consensus disorder prediction | 508 | 543 | - | - | |
Gma05g00445 | 1196 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
Gma05g00445 | 1196 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Gma05g00445 | 1196 | Gene3D | - | 120 | 229 | - | - | |
Gma05g00445 | 1196 | MobiDBLite | consensus disorder prediction | 268 | 334 | - | - | |
Gma05g00445 | 1196 | SUPERFAMILY | SMAD/FHA domain | 108 | 221 | IPR008984 | GO:0005515 | |
Gma05g00445 | 1196 | MobiDBLite | consensus disorder prediction | 19 | 33 | - | - | |
Gma05g00445 | 1196 | Coils | Coil | 852 | 872 | - | - | |
Gma05g00445 | 1196 | Pfam | AAA+ lid domain | 1085 | 1120 | IPR041569 | - | |
Gma05g00445 | 1196 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 76 | 1196 | - | - | |
Gma05g00445 | 1196 | MobiDBLite | consensus disorder prediction | 509 | 543 | - | - | |
Gma05g00445 | 1196 | CDD | FHA | 141 | 221 | IPR000253 | GO:0005515 | |
Gma05g00445 | 1196 | CDD | AAA | 930 | 1063 | - | - | |
Gma05g00445 | 1196 | Gene3D | - | 1064 | 1158 | - | - | |
Gma05g00445 | 1196 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 890 | 1171 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma05g00445 | Gma-Chr5 | 4230856 | 4248403 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma05g00445 | 891 | 1139 | Calmodulin-binding Proteins | AT3G56690 | 39.453 | 2.17e-41 | 164 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma05g00445 | - | - | gmx:100790427 | 2310.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma05g00445 | 05 | 4230856 | 4248403 | Gma05g00445 | 05 | 4230856 | 4248403 | ECH | |
Gma17g01200 | 17 | 10548167 | 10560499 | Gma05g00445 | 05 | 4230856 | 4248403 | GST | |
Gma05g00445 | 05 | 4230856 | 4248403 | Gma04g01889 | 04 | 49130289 | 49154305 | PCT | |
Gma05g00445 | 05 | 4230856 | 4248403 | Gma06g01522 | 06 | 14661950 | 14682119 | PCT | |
Gma04g01889 | 04 | 49130289 | 49154305 | Gma05g00445 | 05 | 4230856 | 4248403 | PCT | |
Gma06g01522 | 06 | 14661950 | 14682119 | Gma05g00445 | 05 | 4230856 | 4248403 | PCT |