Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00445 ATGGTTTCGACGAGACGCAGTGGATCTGTCTCTGCCAAAAGATCTTCCTCCTCGGAAGATAAACCTCCTTCGCCGAAGCGCCAAAAGGTCGACAATGGCGGTTCGTCGGAGAAACCGGTGCCGACGCCGGCGGAAAATTCCAAGGACTTATCTACTCCGGAGCCCGTGCTTGATCCCGGAGAATGTGGCTCCGGCGAAGCTCAGATCGCCGGCGCGGTTGCCGACGATGGAGTGAGCTCCGGCAAGGGTGACGCTACGCCGGCTGTGCCTGTCACGGCGCCGATTGCTGATGCCGCATGTCCGTCGTTCTCTTCGTGGATTAATTATCAGAAACAAAATCCGAATATCGAAGGTGCGCCGTGGTGCAGGTTCTTGTCGCAGTCTGCACAGAATCCTAATGTTGCTATTTGCACACCCAATTTCACGATTGGTTCTAATAGAGGTTGCAACTTTCCACTGAATGATCAAACTATAAGTGGGAATTTATGCAGGATCAAACATACACAGGGCGATGGGAGTGCTGTAGCTGTGCTAGAAAGTATGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACGCATGTCAAGAGGAATACCAGCTGTGTACTTACCTCGGGTGATGAAGTGGTTTTTGGTGTGCTTGGAAATCATTCTTATATTTTCCAGCAACTAAATACCGAGGTTGCTGTTAGGGGTGCAGAAGCTCAAAGTGGTATTGGGAAATTTCTGCCACTTGAAAGGAGAAGTGGAGACCCCTCAGCTGTGGATGGGGCCTCTATTTTGGCTTCTCTTTCCAACAGACAGGACCTTACAAGATGGAAATCTCCATCTCAGACCTCCAGTAAACCTCACCAGGGTACCGATGTCTCTAGTCGTACTGTTCATCATAATTGTACAGAAACTGAGCTTGATGGCTCAGAATCAACTCCAAATGTGCGGAGTGATAAAGCAGCAGATGTTCAAACAAGTGATAATAATTCAACAATGGATTGCAATCCAGATGCTGGTGCAGAGGCAGGCAATGCTAAAATCTATGGGGTATTGGAAGAAAGAAATGGGACACTGGATATGCAGGCTGCATCGACTTTGGGTACATCTGTGCGCTGTGCAGTGTTTAAAGAAGATGTAAATGCTGCGATACTGGATGGAAAAGAAATAGATGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAATACAAAAAATGTCCTGGTGGCTGCTTGCTTTATGCACCTCATGCATAAAGAACATGAAAAGTTTACTGCAGATCTTACAACCATAAACCCTCGTATTCTACTCTCTGGACCTGCAGGGTCTGAAATATATCAGGAGATGTTGGTAAAAGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGTCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGCTACTCAAAGATGGACTTAATGCTGAAAAATCCTTCCGCTGCACTAAACTAAGTCCTACAGAAGACATGGCTAGGATCATGGATCCATTAGCTAGCGAAACAGAGACACCTAGCCCTTCAAATGCACCTACATCATATGGCTTTGAGTCTCAACCTAAGTTGGAAACCGATAACACGCCATCCACCTCTGGGACAGCTAAAAGTTGCTCATTCAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGCGTATATCAGACATCTCCAAGGGGACCGTCTAATGGAAGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAACCCATACCTGATGGAGTTGATCTTGGTGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCACCGATCTTCGTTTGGAAAGCAGTGCTGTAGAAGAACTGGACAAATTACTTATTCATTCATTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAGTGCACCATTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAATGGAGATTCACATTCATTTAAAAGTAAGCTTGAAAATCTTCCGGATAATGTGGTCGTAATAGGTTCACACACACAAAATGACAGTCGCAAGGAAAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCAgatagttttggacgattgcatgacagggggaaggaagtcccgaaacaaaatagaactttgaccaagcttttcccaaataaaattacaattcacatgccacaggatgaggctcttctagcatcttggaagcagcaactggatcgagatgttgagactctcaaaatcaaaggaaatttacatcacctgcgcacaGTTTTGGGACGTTGTGGAATGGAATGTGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGCCACCACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCAAAGCTTGCATTGTCCTGTGAGAGCATTCAGTATGGAATTGGGATCTTGCAGTCTATCCAGAATGAGTCTAAGAGCCTGAAGAAATCTCTTAAGGATGTTGTGACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATCGATGTTACTTTTGATGATATTGGAGCTCTTGAAAAGGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAACTTTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAAGGAATCCTATTATTTGGTCCCCCTGGAACTGGTAAAACAATGCTCGCAAAGGCAATAGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGTATTACCTCTAAGTGGTTTGGGGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTCTGGCGAGTAAAATTTCACCTAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGTAGGGAAAACCCAGGAGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGCACGAAGGAAACAGAGCGAGTTCTTGTGCTGGCAGCCACTAACAGGCCTTTTGACCTTGACGAGGCTGTCATAAGGAGGATGCCAAGAAGATTGATGGTAAATTTGCCAGATGCTCCTAATAGAGCGAAAATATTGAAAGTTATCCTGGCAAAAGAGGAATTGTCTCCTGATGTTGATTTAGATGCAGTAGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCAGCACATCGGCCTATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACGTGCTGCTGCTCTAGCAGAAGGCCAACCAGCTCCAGCATTATGCAGCAGTGGGGACGTTAGATCTTTAAACATGGAAGACTTTAAATATGCTCATCAGCAGGTATGTGCAAGTGTTTCTTCTGAATCAGTAAATATGACTGAGCTTTTACAATGGAATGAATTATATGGAGAAGGGGGTTCAAGAGTAAAGAAAGCACTCAGCTATTTCATGTGA 3591 0.4127 MVSTRRSGSVSAKRSSSSEDKPPSPKRQKVDNGGSSEKPVPTPAENSKDLSTPEPVLDPGECGSGEAQIAGAVADDGVSSGKGDATPAVPVTAPIADAACPSFSSWINYQKQNPNIEGAPWCRFLSQSAQNPNVAICTPNFTIGSNRGCNFPLNDQTISGNLCRIKHTQGDGSAVAVLESMGSKGSVLVNGTHVKRNTSCVLTSGDEVVFGVLGNHSYIFQQLNTEVAVRGAEAQSGIGKFLPLERRSGDPSAVDGASILASLSNRQDLTRWKSPSQTSSKPHQGTDVSSRTVHHNCTETELDGSESTPNVRSDKAADVQTSDNNSTMDCNPDAGAEAGNAKIYGVLEERNGTLDMQAASTLGTSVRCAVFKEDVNAAILDGKEIDVSFDNFPYYLSENTKNVLVAACFMHLMHKEHEKFTADLTTINPRILLSGPAGSEIYQEMLVKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFRCTKLSPTEDMARIMDPLASETETPSPSNAPTSYGFESQPKLETDNTPSTSGTAKSCSFKLGDRVKFSCSSSCGVYQTSPRGPSNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGACEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVVFSESRSAPFILFMKDAEKSIVGNGDSHSFKSKLENLPDNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKQNRTLTKLFPNKITIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRTVLGRCGMECEGLETLCIKDQTLTNENAEKIIGWALSHHLMQNSEAKPDSKLALSCESIQYGIGILQSIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAKEELSPDVDLDAVASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALAEGQPAPALCSSGDVRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNELYGEGGSRVKKALSYFM 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00445 1196 Gene3D - 890 1171 IPR027417 -
Gma05g00445 1196 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 76 1196 - -
Gma05g00445 1196 ProSitePatterns AAA-protein family signature. 1035 1054 IPR003960 GO:0005524|GO:0016887
Gma05g00445 1196 MobiDBLite consensus disorder prediction 268 293 - -
Gma05g00445 1196 MobiDBLite consensus disorder prediction 302 331 - -
Gma05g00445 1196 Pfam FHA domain 142 211 IPR000253 GO:0005515
Gma05g00445 1196 Pfam ATPase family associated with various cellular activities (AAA) 932 1061 IPR003959 GO:0005524|GO:0016887
Gma05g00445 1196 SMART AAA_5 928 1065 IPR003593 -
Gma05g00445 1196 MobiDBLite consensus disorder prediction 508 543 - -
Gma05g00445 1196 MobiDBLite consensus disorder prediction 1 65 - -
Gma05g00445 1196 MobiDBLite consensus disorder prediction 1 18 - -
Gma05g00445 1196 Gene3D - 120 229 - -
Gma05g00445 1196 MobiDBLite consensus disorder prediction 268 334 - -
Gma05g00445 1196 SUPERFAMILY SMAD/FHA domain 108 221 IPR008984 GO:0005515
Gma05g00445 1196 MobiDBLite consensus disorder prediction 19 33 - -
Gma05g00445 1196 Coils Coil 852 872 - -
Gma05g00445 1196 Pfam AAA+ lid domain 1085 1120 IPR041569 -
Gma05g00445 1196 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 76 1196 - -
Gma05g00445 1196 MobiDBLite consensus disorder prediction 509 543 - -
Gma05g00445 1196 CDD FHA 141 221 IPR000253 GO:0005515
Gma05g00445 1196 CDD AAA 930 1063 - -
Gma05g00445 1196 Gene3D - 1064 1158 - -
Gma05g00445 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 890 1171 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00445 Gma-Chr5 4230856 4248403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00445 891 1139 Calmodulin-binding Proteins AT3G56690 39.453 2.17e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00445 - - gmx:100790427 2310.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00445 05 4230856 4248403 Gma05g00445 05 4230856 4248403 ECH
Gma17g01200 17 10548167 10560499 Gma05g00445 05 4230856 4248403 GST
Gma05g00445 05 4230856 4248403 Gma04g01889 04 49130289 49154305 PCT
Gma05g00445 05 4230856 4248403 Gma06g01522 06 14661950 14682119 PCT
Gma04g01889 04 49130289 49154305 Gma05g00445 05 4230856 4248403 PCT
Gma06g01522 06 14661950 14682119 Gma05g00445 05 4230856 4248403 PCT