Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00429 ATGGCAACCGGTTCCCGATTGTTCCTGATCCCCGCTGCGAGGCCCGTTCTCTGCAAAAACGTCTTCTTCATTTCCTCTTATTCTACTCGCACGCTCGAACTGTGCGAATCATCATCGTCTTCCTCTTCCTCTGCGCTCGCAGAGGAAGAGTCCCGAAACGTGAGGGTTTGGGCTTGGTGGGACGTCAAAAACTGCCACGTGCCCCCCAATTTCGACGCTTCCAAAGTTGCCCCCAAAATCATGGAGGCAGTGAGAGCCAACGGCATCAAAGGCCCTCTCAACATCACTGCCTTTGGCGACGTTCAGCTACTCACCCGGGCCCACCAGGAAGCACTCGCCTACACCGGCGTTCGCTTCACCCACGTTAACGATGGAAAGAGTAGTGCCGATATTCTTTTTGACTTAATGTATTGGGTTTCGCAAAACCCTCCACCCGCGCATATACTCTTGATATCCGGCGATAGAGACTTCGCCGGCGTGTTGCATAGGTTGAGAATGAGTAACTACAATGTCTTGCTCGCTACTCCAGAGAGCGCGCCTGGTGTTCTTCACAGTGCTGCCACGATAGCGTGGCAATGGTCTTCGATGCTCAAGGGAGAAAATCTTACTGGAAAATGTTTCAACCATCCACCTGATGGGCGGTATCGTTCTTGGTATGGAAGCTACAAGCTGACGGCTTGTCTTGAAAAGCCGGCTCCGGTTGTGGCTCAGGAGGCTTCTGCTGCTGCCTCTTTGCCCAATGTGGAGGCTTACGAGCCTTCTTCTTCGGGTTTGGGTTCGGTTCCGAAATCGGTTGTGAAGCAGGTTAGGCATATATTGAGTTTGCATCCAGAAGGGATAGGCATTAGTGTTCTTCGCGCCGAGTTGGCAAAGTGTGGTGTGCGTTTGGATAAAGGTTTCTTTGGACATAAAAGGTTTTCCCGCTTTCTGTTGTCGTTGCCACATGTACAGCTTCAGCCCAGTGGTGATGCTAATTTTTCTGTGCATTTGGTTCCTTGGGAATTCCCAGAACCTTGTGAGAGTATTCCTGTGGCATCAACAATGTCTGGTGCGAATAGTGAGGAGAAAGGAAGTGCAGCAACTCCAAAGGTAAACGGTGAGGATAAAAGAAAGGTTAGGGTTGCTGATGAGAAATTCTCAATCACCTCGATCCTTGAAAGGAGTTCGGATGACAATTTAAAGCCAGTCCAACCGGGGCTTTCACAAGGGAGATCCAATGAGGAATATATGGATGGTGAATCATCATCTCCTGTATTGGTTGAAAAACATGTTTGTCAGCCACCAAATGAGTTGCAGAAATCTTCTGTAGCTTCTGACAAGGTTGTGAATGTGGCTAATGCACAACAATCAGAGACTCAACTGCCACCCAAGGACAACAAAGATTCCGAAACGAAGATGGATTCCTTAAAAGTGACTTCTCAAAAATCGTCTGTTGAAGACATTGTTAGGTCTGAGGTTGCAAGTCATAAAAGTAAGGGAAAAAATGCAACTTCAGTGAATCACTCAGCTGGAAATGGTCAATCAATGGCGGAAGACTATGTTATCACAAATTATGAATCTGGAGATGTTGAAGCAGAGAACAAATATGAGGATCCAACTAGAATGGAGGTTGATGAAGTTGTTCACAGTCCATCTTCTTCACCAGTTGATGGCTCTCCAGTTGTCCAAACACCTGCTGGAAGTCCTGAAACTAATAACAGAAGTCCAACATTCTTTAGATGGATTAGAAGTTTGTGGCCATTTGGGAAAAGCAATGAAAAGTATGATGATTTGATCGCTAATCAGAACAAGCTGGTTAGCCatgttgaggattccaagttatctgaactggacccgactgttagtcaatctgaagagcccaagttatcagaactggatcagaatgttagttatgttgaagattccaagttatctgaattggaccagactgttaggcaacttgaagagcccaagttaacagaattggatcagagtgttagtcattctgGAAAGCCTGAGTTATTTTCTAGTGCTTCCTTTTGGAATGATATGGAATCTTTCATTTTTGCGCCCAAGGGATCACTTCTTTTCTCCCAGTCAAGAAGCAGGGAGGATGTGGTGCATAAATTACAAAATGGTGGACCCCTGGTTCTTAGATCACTCCCCAAAGAAGACTTCCTTCAATTGGTGGAATTGTTAATAACAGAGAAAAAATGGTTGGAGGAAAGCCCCTCCAAAACATTTCCTTTTAAGATAACTCAACCTGTTCAGAAGAATTCATTGGTGAAATCCCATGGTGCAAATGCTTTGAGATCTCTCTTTATAGGTAGAAGAACATCACAGTTGAACTTGCCAAAATCATTAGAACATGATGTGGAGAAACACAATCAGAGTATTTCTCTTGCTCGAGTTTCTGCACCGGCTACGGAAACAAAATATACTGAGCGATCTAGAAATGATATATTAGAAGACTGTAAAAAACTCGTGAGTGAGATACTGAGGGAACACCCGGAGGGGTATAATATTGGTGCTTTCGGAAGACTATTTGTTGATAGGTATGGCTATCATCTTGATATACAGAAGCTGGGTTATCAAAAGTTGGCAGCCTTGTTACAGATAATGCCTGGGGTTAAATTAGAGTCCACTTATATTTTTCCTTCTGTTCCTGCTGTCTGTGATTCTGACTTGGAAACTTCTATCCTCAAAACTCAAGCAACCACTGATATTCATGCAGCTTCCAACTCAGATAGTGAATTATCTGAGTCAGCCCCGAAAGATGATAACATGGAATCCCCATGGCAGGAGTTAGGTCCTGTTTCTTTGGATTTGAAGTCAAGTCAGAAAGCTATAGAACTGGATACATCAAAATCAAAGCATCTTGATTATGAACCTGTCGAATCAGATGATGAGTTTTCTGCATCTGAAGGAGATGGCTCTTGTTTAACTCAATCAGCAGAGCAAAGAAAGCCAAAATTTTTAGCTGGCCATGGCCATGACATTTTGAGGAAGATTCCAATGATTTCTAGTTGCAACTCTGGAAATTCTTTCCATTTTAACATTTACTGCATGGTGATCATAGTACGGCGATGA 3069 0.4158 MATGSRLFLIPAARPVLCKNVFFISSYSTRTLELCESSSSSSSSALAEEESRNVRVWAWWDVKNCHVPPNFDASKVAPKIMEAVRANGIKGPLNITAFGDVQLLTRAHQEALAYTGVRFTHVNDGKSSADILFDLMYWVSQNPPPAHILLISGDRDFAGVLHRLRMSNYNVLLATPESAPGVLHSAATIAWQWSSMLKGENLTGKCFNHPPDGRYRSWYGSYKLTACLEKPAPVVAQEASAAASLPNVEAYEPSSSGLGSVPKSVVKQVRHILSLHPEGIGISVLRAELAKCGVRLDKGFFGHKRFSRFLLSLPHVQLQPSGDANFSVHLVPWEFPEPCESIPVASTMSGANSEEKGSAATPKVNGEDKRKVRVADEKFSITSILERSSDDNLKPVQPGLSQGRSNEEYMDGESSSPVLVEKHVCQPPNELQKSSVASDKVVNVANAQQSETQLPPKDNKDSETKMDSLKVTSQKSSVEDIVRSEVASHKSKGKNATSVNHSAGNGQSMAEDYVITNYESGDVEAENKYEDPTRMEVDEVVHSPSSSPVDGSPVVQTPAGSPETNNRSPTFFRWIRSLWPFGKSNEKYDDLIANQNKLVSHVEDSKLSELDPTVSQSEEPKLSELDQNVSYVEDSKLSELDQTVRQLEEPKLTELDQSVSHSGKPELFSSASFWNDMESFIFAPKGSLLFSQSRSREDVVHKLQNGGPLVLRSLPKEDFLQLVELLITEKKWLEESPSKTFPFKITQPVQKNSLVKSHGANALRSLFIGRRTSQLNLPKSLEHDVEKHNQSISLARVSAPATETKYTERSRNDILEDCKKLVSEILREHPEGYNIGAFGRLFVDRYGYHLDIQKLGYQKLAALLQIMPGVKLESTYIFPSVPAVCDSDLETSILKTQATTDIHAASNSDSELSESAPKDDNMESPWQELGPVSLDLKSSQKAIELDTSKSKHLDYEPVESDDEFSASEGDGSCLTQSAEQRKPKFLAGHGHDILRKIPMISSCNSGNSFHFNIYCMVIIVRR 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00429 1022 MobiDBLite consensus disorder prediction 603 624 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 390 416 - -
Gma05g00429 1022 Pfam OST-HTH/LOTUS domain 814 873 IPR025605 -
Gma05g00429 1022 Pfam OST-HTH/LOTUS domain 263 324 IPR025605 -
Gma05g00429 1022 Gene3D - 809 876 IPR041966 -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 609 624 - -
Gma05g00429 1022 ProSiteProfiles OST-type HTH domain profile. 814 888 IPR025605 -
Gma05g00429 1022 CDD LOTUS 815 870 - -
Gma05g00429 1022 CDD PIN_limkain_b1_N_like 55 176 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 902 927 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 523 567 - -
Gma05g00429 1022 PANTHER LIMKAIN B LKAP 21 984 IPR024768 GO:0005777|GO:0010468|GO:1903231
Gma05g00429 1022 MobiDBLite consensus disorder prediction 344 371 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 491 508 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 523 538 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 950 973 - -
Gma05g00429 1022 Pfam NYN domain 55 187 IPR021139 GO:0004540
Gma05g00429 1022 ProSiteProfiles OST-type HTH domain profile. 261 332 IPR025605 -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 390 412 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 545 567 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 345 359 - -
Gma05g00429 1022 Gene3D - 262 331 IPR041966 -
Gma05g00429 1022 PANTHER EMB|CAB71880.1 21 984 - -
Gma05g00429 1022 MobiDBLite consensus disorder prediction 446 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00429 Gma-Chr5 4061266 4065386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00429 47 199 C2H2 Transcription Factor Family AT5G61190 41.667 5.87e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00429 - - gmx:106794208 1914.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01186 17 10402046 10405750 Gma05g00429 05 4061266 4065386 GST