Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00417 atGGCTCCCCAAACCATTTCCATTCACTACCACACCACCCGCTTCTTACCTCAACCCGATGTCTTCATTCGCACTTCCCACGGAACACGCATTCCAGCCCACGCCGGCATTCTGGCTTCCATGTCCCCTGTTTTTGACAACTTTATAGATCGCCCACGTAAGCATCGGAGCTCCGAGAGAATTATCCAAATCCACGGCGTCCCCTGCGACGCCGTCACCGCCTTCGTCGGATTCCTCTACTCCTCCAGGTGCACGGAGGAGGAGATGGACAAGTACGGGATGCACCTTCTTGCATTGTCGCACGTGTACATGGTGCCGCAGCTGAAGCAGAGGTGCATCAAGGGTTTGACCCACCGCTTGACCACGGAGAACGTGGTGGACGTGCTTCAACTCGCGCGTCTCTGTGACGCGCCGGATCTCCATCTTCGCTGCATGAAGCTCCTCGCCAACAATTTCAAAGCGGTGGAAGCAACGGAGGGGTGGAAGTTCCTCGTCAAACACGACCCCTGGCTCGAACTCGACATTCTCCGCTTCATCGACGAACACGAAACCAGGAAAAAGAAATCGAGGAAGTATAGGATGGAGCAGGGGCTATACGCGGAGCTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCTATGATGGGTGTACCCACGTTGGACCGTACGATGCTGCGGAGGTGAAGAGGGAGAGGACGCCGTGTGGGAGATTCGCCACGTGCCAGGCTCTTCAGGTTCTGATCCGCCACTTTGCCACGTGCGAGAAGAAGGTGCGCGGCGGCTGCGTGCGGTGCAAGCGAATGTGGCAGCTCTTTCGACTCCATTCCTATGTTTGTCACCACACCGATTCCTCCTGCAAGGTTCCTTTTTGCAGGCAATTTCAATTGAGAATGCAGCAAGAGAAACGGAAAGATGATGCTAAGTGGAAACTACTAGCGAGGAAGGTGGCCTCAGCCAAAGTCATGTCTTCATTGTCTCTGCCAAAGAGGAAGCGAGATGAAGAAACAAGAGTGAATATAAACAATCCCGGGATTAGAAGTTTTAAATTACTATGA 1056 0.536 MAPQTISIHYHTTRFLPQPDVFIRTSHGTRIPAHAGILASMSPVFDNFIDRPRKHRSSERIIQIHGVPCDAVTAFVGFLYSSRCTEEEMDKYGMHLLALSHVYMVPQLKQRCIKGLTHRLTTENVVDVLQLARLCDAPDLHLRCMKLLANNFKAVEATEGWKFLVKHDPWLELDILRFIDEHETRKKKSRKYRMEQGLYAELSEAMECLEHICYDGCTHVGPYDAAEVKRERTPCGRFATCQALQVLIRHFATCEKKVRGGCVRCKRMWQLFRLHSYVCHHTDSSCKVPFCRQFQLRMQQEKRKDDAKWKLLARKVASAKVMSSLSLPKRKRDEETRVNINNPGIRSFKLL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00417 351 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 349 IPR044513 -
Gma05g00417 351 CDD BACK 121 168 - -
Gma05g00417 351 SUPERFAMILY POZ domain 20 150 IPR011333 -
Gma05g00417 351 Gene3D TAZ domain 194 320 IPR035898 -
Gma05g00417 351 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Gma05g00417 351 SMART BTB_4 19 120 IPR000210 GO:0005515
Gma05g00417 351 Gene3D - 121 193 - -
Gma05g00417 351 Coils Coil 351 351 - -
Gma05g00417 351 Pfam BTB/POZ domain 19 118 IPR000210 GO:0005515
Gma05g00417 351 SMART TAZ_2 196 292 IPR000197 -
Gma05g00417 351 Gene3D Potassium Channel Kv1.1; Chain A 15 120 IPR011333 -
Gma05g00417 351 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 1 349 - -
Gma05g00417 351 Pfam TAZ zinc finger 203 291 IPR000197 -
Gma05g00417 351 SUPERFAMILY TAZ domain 195 300 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00417 Gma-Chr5 3921124 3924664 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gma05g00417 BTB 3.7e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00417 - - gmx:100807120 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00417 05 3921124 3924664 Gma05g00417 05 3921124 3924664 ECH
Gma17g01174 17 10260656 10263453 Gma05g00417 05 3921124 3924664 GST
Gma05g00417 05 3921124 3924664 Gma04g01852 04 48613012 48615882 PCT
Gma04g01852 04 48613012 48615882 Gma05g00417 05 3921124 3924664 PCT