Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00393 ATGGAAGATGTGAATCGCACCCCAAGAGAAGCAAAGGATTACTATTCTAGATCAATATGGTTGTCAGAAACTGCGCAGACATTTGGGAATATCAAGAGAAGTGACAGAAATGTTGTTGATGGCAGAGATTCCTACGGCTATAACTCCCAAGAAATAGTGACTCCTGAAGTTTCTGGAGCATTCGATGAAATCAAAGGTTTAATCAGAGTTAATGATGAGGGTGTTGGTGAAGAAAGCGGTGACTATGGCCACTATTCTAGACAATCGTTGACAACAGAAATTGTAGAGATAGTTGAAGATGGCAAGAGCATAAGCAACAAAGATAGAAGAGTTGATGATCTTTATGTGGCTGTTGGCAAAGATGACTTGGATGCAGTGAAATGGGCTCTTGATCATGCAGTTTCTCCCGGTTCCCGGATTTTTCTTATCCATGTCTCTTCTCCAATCACATTGATTCCTACACCAGTTGGTAAGTTTGAAAGAAGTAAACTGACCCAGCAACAAGTGGGAATATACGTGAATGAGGTGAACAACAAGAGGAAGGATCTTTTGCAAAAGTACATTCAGATGAGTAATGAAGCCAAGGTAACTGCAGAAACGTTGCTCCTGGAAAGCAATGACACAGAAAAAGCAATTCTGGACCTCATCTCTATTCTCAACATAACCAACATTGTCATCGGAATCAAAAAGCTACCCTACACACGGCGCAAGAACAAATTGAGCAAAGGAGAGTTCGTAAAGAAACATGCACCGAGTTCCTGTGAAGTTACCTTGGTTTATAACGGCGAGGTGTTAGTGTCTGACCCTTACATGGATGGCTTGGTATCCTATGGCCTAGCATCGCAAAATAAAAGTCACTCGAAAAACAACTTCTTTCAGTGCATGTGCTTTTCAGGATGGGTGAGAGAAGACAATGGTAGTTGCTAG 927 0.4164 MEDVNRTPREAKDYYSRSIWLSETAQTFGNIKRSDRNVVDGRDSYGYNSQEIVTPEVSGAFDEIKGLIRVNDEGVGEESGDYGHYSRQSLTTEIVEIVEDGKSISNKDRRVDDLYVAVGKDDLDAVKWALDHAVSPGSRIFLIHVSSPITLIPTPVGKFERSKLTQQQVGIYVNEVNNKRKDLLQKYIQMSNEAKVTAETLLLESNDTEKAILDLISILNITNIVIGIKKLPYTRRKNKLSKGEFVKKHAPSSCEVTLVYNGEVLVSDPYMDGLVSYGLASQNKSHSKNNFFQCMCFSGWVREDNGSC 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00393 308 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 75 303 - -
Gma05g00393 308 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 75 303 - -
Gma05g00393 308 Pfam Universal stress protein family 122 235 IPR006016 -
Gma05g00393 308 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 121 257 - -
Gma05g00393 308 CDD STK_N 115 262 - -
Gma05g00393 308 Gene3D HUPs 116 259 IPR014729 -
Gma05g00393 308 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00393 Gma-Chr5 3710323 3712833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00393 109 262 U-box Gene Family AT2G45910 29.814 1.11e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00393 - - gmx:102668724 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00393 05 3710323 3712833 Gma05g00393 05 3710323 3712833 ECH
Gma17g00802 17 6714525 6717345 Gma05g00393 05 3710323 3712833 GST