Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00377 ATGCAAGGGAAAACTCCTGTTTTTGTCTTGGCTACTGCTGAGTTGAGGAGGCTCCCCAGGGAGGAGGCGAGCCGGGTCTTGGGGGACGTCGAGGCTGTTGTGAAAGATCATAACTTTATGTTTAGCAAGAGCTGGATAAGGTTTTTGAGTGGGAGGGAGGAAGCTTATTATGGTTGGGTGGCTTTGAACCACAAAATGGGCATGTTCGATAGCTACCCAGGGTCTCCCACTTTGGGACTTGTTGATTTGGGTGGCTCATCGTTGCAGGTTGTGGTAGAGATAGATGGTGCTGGGGATGATGTGCACATGATGAGATTGAAGCTCAGCTCAACAGAACCTCGGATTTTGGCATACTCATTGCCTGCATTTGGCTTAAATGATGCGTTTGATAGGACAGTTTCTCATGCTCAGGAACAATCAAACCAACACCAGGAAAGTGAACATTATTCTTTACGTCTTACCGGAGAACTTGATAGGGAGCAATGCAAAGAACTAGCTATTGCTGCTGCTATGAACTTGAGTGATTCCAAAGTGTCACATCTGAACGTTAGCAAAAATTGTCAAGCTAGTTCATTTTCTGGTATTGGTAAGGGTGACATTTCATGGACCTTAGGAGCTGCATTGATTGAAGGGAAATTTCTGTGGTTAAATATCAAGTTAAGCTACCAATGCCAAGCAGGAGGGGCTTCTGTTCCTGGCTCATCTTTGCCGTCTTATACTCATGAGTATCAGGTGCCATGA 741 0.4548 MQGKTPVFVLATAELRRLPREEASRVLGDVEAVVKDHNFMFSKSWIRFLSGREEAYYGWVALNHKMGMFDSYPGSPTLGLVDLGGSSLQVVVEIDGAGDDVHMMRLKLSSTEPRILAYSLPAFGLNDAFDRTVSHAQEQSNQHQESEHYSLRLTGELDREQCKELAIAAAMNLSDSKVSHLNVSKNCQASSFSGIGKGDISWTLGAALIEGKFLWLNIKLSYQCQAGGASVPGSSLPSYTHEYQVP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00377 246 Gene3D Exopolyphosphatase. Domain 2 50 224 - -
Gma05g00377 246 Pfam GDA1/CD39 (nucleoside phosphatase) family 2 177 IPR000407 GO:0016787
Gma05g00377 246 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 137 197 IPR000407 GO:0016787
Gma05g00377 246 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 137 197 - -
Gma05g00377 246 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 195 219 IPR000407 GO:0016787
Gma05g00377 246 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 2 145 - -
Gma05g00377 246 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 145 IPR000407 GO:0016787
Gma05g00377 246 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 195 219 - -
Gma05g00377 246 Gene3D - 2 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00377 Gma-Chr5 3520741 3524653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00377 5 135 Nodulin-like Gene Family AT4G19180 42.748 5.23e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00377 - - gmx:100820393 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00377 05 3520741 3524653 Gma05g00377 05 3520741 3524653 ECH
Gma05g00377 05 3520741 3524653 Gma01g02215 01 57376929 57380785 PCT
Gma05g00377 05 3520741 3524653 Gma11g00202 11 1592377 1595541 PCT