Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00365 ATGGATTTGCATGAAAACTACTTGAAACCAAGCATGGAAGATCAGCTTCCTTTTGGAACTCCTTCCACGCAGGGTTTCTTGCAAGATTTTCATCATATTGATCATCAGTTTCATGTGAATGGCTCCTCATCATCCAATCCCATTTTTGGGGTGCAAACTCCAAATTTTGATCCCTTTGATCAAAATGTAACATGTGAGTCTGCACCTCCTGATTTTGAAGCTTATGAGTGCAAGCCCTTAGCTGAGAGTAATGGTATTGGACATGCTCATCTTATGAACAATTTCCAATATGCAGGTTACAGTTTGAACCTCCCTCGGACGAATCAACTGGATTTGATGGTTGCAAACCAAAGTTATATGACCTTTAATGCTCTTGAAACCAAGCCTTTGAACTTTGTTGTACCAGATGAAGTCTCATGCATTTCCCCACCAAATTATTATAAGAGAGTTGGCTTGAATAAAAACCTCAGGGAATCTCCAAGCACTAGAAGAACATTCAAGGCCCGGAAGAAGTCCAACATAGTGAAGGGGCAATGGACATCAGATGAAGACAGATTGTTGATTCAACTGGTAGAACAATTTGGAGTGAGGAAGTGGTCACATATAGCTCAGGCGTTGCCTGGAAGAATAGGGAAACAATGCAGAGAACGATGGCATAACCATTTGAGGCCAGACATTAAGAAGGACACATGGACTGAAGAAGAGGATAAGATACTGATCCAAGCTCATGCAGAGATAGGAAATAAGTGGGCTGAGATTGCAAAAAAATTGCCTGGAAGAACTGAGAACTCAATCAAAAACCATTGGAACGCAACAAAGCGAAGGCAATATTCCAAAAGAAAGTGTCGTTCAAAGTACCCTAGAGGCTCTCTTCTTCAGGAATACATCAAGAGCTTGAACTTGGACAAAAATCCACCTATAGACTATCGAAAAAAATCTGCCAAAAATGCTAATGCCAATACAAACAGCAATGGCAAAGCAGCAGCTCAGCCCCAGTGTTCAGATCAATTTTGTCTCAATAGCCAGATGGTGCCAAGGTATGATTTTAACGAGGTCCCAGATTTTTGTTTGGATGATAATTTGTTTGAAGAGGGGTGCAGCATTGATTCCCTGCTAGATGATATGCAAAGTGCATCTACTATGGATGAGAAAGGCTTTGATGAAAAAATAATGCAATGTGCTCCTACTATGGAGGGAAAACAATCTCATCAGGGTGGCATGCAGTGTGTTCATGTTGTTGATGTTGATGTGCATCATGAGACTGAGATGATGGCACACACGAATGGGATTGAAGTTAAGAAGGAACTTGATTTCGTGGAAATGATGTCCCACATGAATGGAAACCATTATAGTATACACTCACCATGTTGA 1371 0.4092 MDLHENYLKPSMEDQLPFGTPSTQGFLQDFHHIDHQFHVNGSSSSNPIFGVQTPNFDPFDQNVTCESAPPDFEAYECKPLAESNGIGHAHLMNNFQYAGYSLNLPRTNQLDLMVANQSYMTFNALETKPLNFVVPDEVSCISPPNYYKRVGLNKNLRESPSTRRTFKARKKSNIVKGQWTSDEDRLLIQLVEQFGVRKWSHIAQALPGRIGKQCRERWHNHLRPDIKKDTWTEEEDKILIQAHAEIGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGSLLQEYIKSLNLDKNPPIDYRKKSAKNANANTNSNGKAAAQPQCSDQFCLNSQMVPRYDFNEVPDFCLDDNLFEEGCSIDSLLDDMQSASTMDEKGFDEKIMQCAPTMEGKQSHQGGMQCVHVVDVDVHHETEMMAHTNGIEVKKELDFVEMMSHMNGNHYSIHSPC 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00365 456 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 227 277 IPR017930 -
Gma05g00365 456 Gene3D - 229 281 - -
Gma05g00365 456 CDD SANT 230 273 IPR001005 -
Gma05g00365 456 SUPERFAMILY Homeodomain-like 173 269 IPR009057 -
Gma05g00365 456 Pfam Myb-like DNA-binding domain 179 236 - -
Gma05g00365 456 Gene3D - 175 227 - -
Gma05g00365 456 ProSiteProfiles Myb-like domain profile. 223 273 IPR001005 -
Gma05g00365 456 PANTHER BNAC07G50190D PROTEIN 127 302 - -
Gma05g00365 456 CDD SANT 179 222 IPR001005 -
Gma05g00365 456 PANTHER MYB PROTEIN-RELATED 127 302 - -
Gma05g00365 456 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 171 226 IPR017930 -
Gma05g00365 456 ProSiteProfiles Myb-like domain profile. 171 222 IPR001005 -
Gma05g00365 456 SMART sant 175 224 IPR001005 -
Gma05g00365 456 SMART sant 227 275 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00365 Gma-Chr5 3427998 3429951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00365 128 375 MYB Transcription Factor Family AT4G18770 57.252 2.75e-95 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma05g00365 Myb_DNA-bind_6 9.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00365 K09422 - gmx:100816653 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00365 05 3427998 3429951 Gma17g00832 17 7026361 7028371 ECH
Gma05g00365 05 3427998 3429951 Gma05g00365 05 3427998 3429951 ECH
Gma17g00832 17 7026361 7028371 Gma05g00365 05 3427998 3429951 GST
Gma05g00365 05 3427998 3429951 Gma06g01619 06 15902776 15904721 PCT
Gma04g01785 04 47785768 47787670 Gma05g00365 05 3427998 3429951 PCT