Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00343 ATGGTGGTAAGATCATGCTCGAATTTGTCTGACTTGGTGTCCAAGGACAGTTTGAATTCCCCTCAAACTCCTGGAGCTCTTCCCCGACACCTGTCTGTTCCAGGAATTATGTCTGATGTGGATAGCAAACTAACGGGCAATGATGATTCAAATGCTTTCTCATCAGAACTACATCAGAAGAAGATCATTATAGCAGCAAATTTCCTTCCTCTTAATGCTCAAAAGGATGAAATATCTGGCAAATGGTGCTTCACTTATGATGAAGATTCAATCTTGGTGCCATTGAAGGATGGTCCCTCTTCTGACACTGAGGTCCTTTATGTGGGATCTCTGAAGGTTGATGTTGATGCTAGTGAACAAGAGAAAGTTTCTCTTCAGCTACTGGAGGAATTCAATTGCTTGCCTACCTTTATTCCTTCAGACATCCAGAAACTGTTTTATAATGGCTTCTGCAAGCAACATTTGTGGCCTCTGTTCCATTACATGTTGCCGTTGTATCCAGACTACTGCAATCGTTTTGACAAGTCACTGTGGCAGGCTTATGTTTCTGCTAACAAAATATTTGCTGATAAAGTCATGGAGGTTATGAATCCAGAGCATGATTATGTATGGGTTCATGATTATCATCTTATGGTTATTCCAACATTTCTACGGAAGCGATACAGTTGGATCAAGATAGGATTTTTCCTCCACTCTCCATTTCCTTCATCAGAAATTTATCGGGCTTTACCTGTCAGGGATGAAATTTTGAAAGCACTGCTTAATGCAGATTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTTCTTTCCTGCTGCAGTCGAATTCTTGGCTTAGAATATGAATCCAAAAGGGGTTACATCAGGCTCAAATACTTTGGCCGTACAATATTCATTAAAATCTTGCCTGTAGGGATTCATATGGATCGACTTCAATCTGCCTTTAATCACTCTTCTTTTTCAGTCAATGTCAGAGAAATGTCAGAGAAGTTCAAGGAGAAAAAACTTATTCTTGGAGTAGATGATATGGACATTTTTAAAGGTATCAGCCTAAAGCTATTGGCCATAGAACAACTCCTTCAGCAATATCCTGAATTGTTGGGAGAATTAATACTTGTCCAGATTGTAAATCCACCAAGAAGTACTGGTAAGGATGTAGAGGAAGCAAGGAACGAGATGCACATTATTGCCAACAGGATAAATGAAAGGTTTGGTTTGCTAGATTATGAACCTGTCATCATCATCAATCGTCATGTTCCGTTATATGAGAAGGCATCCTACTATGCTTTAGCAGAATGTTGCATTGTGGATGCGGTGCGGGATGGTATGAATTTGGTTCCTTACGAGTACATTGTCTGCAGGCAGGGGAGTCCTACAATGGATGAAGCTTTAGACATTGGTTCTGAATCACCTCGTACAAGTGCACTTGTTGTCTCTGAGTTTATAGGTTGCTCACCTTCTCTTAGTGGGGCAATCAGGGTAAACCCATGGGACATTAATGCTGTAGCCGATGCACTGAATTTGGCCATCACAATGCCCAGTGGAGAGAAACAGTTGCGGCATGAGAAGCACTATCGATATGTTAGCTCTCATGACGTAGCTTACTGGGCCAAAAGTTTTGTGCAAGATCTTGAGTATTCATGCAAGGATCACTATAGTAAAAATCGCTGGGGGATTGGCTTTGGCCTTAATTTCAGAGTTTTGTCCCTTTCTCCTACTTTCAGGAAGCTTAACAAAGACCATGCTGTTTCTGCATATGAAAGGACAAATTGCAGGGCATTCTTTTTGGATTATGATGGAACAGTTGTGCCTTCCGTTGTTAAAACTCCAAGTTCTGAAATCATAGATGTTCTAAATATCCTCTGCAGTGACCCTAAGAACACTGTGTTTATAGTAAGTGGGAGGGGGGAAACCACGCTGAGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCTGCTGAGCATGGTTATTATCTAAAATGGAGTCAACAGTCAGCTTGGGAAATGAACCATACAAGTACCAGTTTTTCTTGGAAAGAGATTGTTGAACCTGTGATGAGATTGTATACTGAGGCAACAGATGGCTCCTATATAGAGACCAAAGAGAGTGCCTTGGTATGGCACTACTATGATGCTGATCCTGATTTTGGATCTTGGCAAGCCAAGCAGCTGTTGGATCACCTTGAAGGCTTATTTGCAAACGAACCGGTAACTGTAAAGAAAGGAAAGCATATTATTGAAGTCAAGTCACTGGGGATTACTAAAGGGTTAGTCGTGGAGGGCATTCTGTCCAAGATGACCAAGAATGGGAAAATACCTGATTTTGTACTCTGCATAGGGGATGATAGATCTGACGAGGACATGTTTGAGAGCTTGCTGAATAAAGTTTACAGTGGAACCTCTTCTCCTGCACCAGAAATCTTTGCATGCACTGTTGGTCAAAAACCAAGTAAAGCTAGGTACTATTTAGAGGATACTGAGGATGTGATGAGGTTACTTCAAGCTCTTGGTACCGTTTCAGTGCCTAAATCAACATCTCCTGAGGAAGACTCTTTTGGAAAAACAGAAGCCTGTTTCGACGTTTGA 2592 0.4113 MVVRSCSNLSDLVSKDSLNSPQTPGALPRHLSVPGIMSDVDSKLTGNDDSNAFSSELHQKKIIIAANFLPLNAQKDEISGKWCFTYDEDSILVPLKDGPSSDTEVLYVGSLKVDVDASEQEKVSLQLLEEFNCLPTFIPSDIQKLFYNGFCKQHLWPLFHYMLPLYPDYCNRFDKSLWQAYVSANKIFADKVMEVMNPEHDYVWVHDYHLMVIPTFLRKRYSWIKIGFFLHSPFPSSEIYRALPVRDEILKALLNADLIGFHTFDYARHFLSCCSRILGLEYESKRGYIRLKYFGRTIFIKILPVGIHMDRLQSAFNHSSFSVNVREMSEKFKEKKLILGVDDMDIFKGISLKLLAIEQLLQQYPELLGELILVQIVNPPRSTGKDVEEARNEMHIIANRINERFGLLDYEPVIIINRHVPLYEKASYYALAECCIVDAVRDGMNLVPYEYIVCRQGSPTMDEALDIGSESPRTSALVVSEFIGCSPSLSGAIRVNPWDINAVADALNLAITMPSGEKQLRHEKHYRYVSSHDVAYWAKSFVQDLEYSCKDHYSKNRWGIGFGLNFRVLSLSPTFRKLNKDHAVSAYERTNCRAFFLDYDGTVVPSVVKTPSSEIIDVLNILCSDPKNTVFIVSGRGETTLSEWFDQCENLGIAAEHGYYLKWSQQSAWEMNHTSTSFSWKEIVEPVMRLYTEATDGSYIETKESALVWHYYDADPDFGSWQAKQLLDHLEGLFANEPVTVKKGKHIIEVKSLGITKGLVVEGILSKMTKNGKIPDFVLCIGDDRSDEDMFESLLNKVYSGTSSPAPEIFACTVGQKPSKARYYLEDTEDVMRLLQALGTVSVPKSTSPEEDSFGKTEACFDV 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00343 863 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 595 793 IPR006379 -
Gma05g00343 863 TIGRFAM T6PP: trehalose-phosphatase 593 838 IPR003337 GO:0003824|GO:0005992
Gma05g00343 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 549 - -
Gma05g00343 863 Gene3D - 721 852 IPR023214 -
Gma05g00343 863 Gene3D - 592 706 IPR023214 -
Gma05g00343 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 846 IPR001830 GO:0003824|GO:0005992
Gma05g00343 863 CDD GT20_TPS 61 546 IPR001830 GO:0003824|GO:0005992
Gma05g00343 863 CDD HAD_TPP 594 833 - -
Gma05g00343 863 Gene3D Glycogen Phosphorylase B; 52 317 - -
Gma05g00343 863 Gene3D Glycogen Phosphorylase B; 318 531 - -
Gma05g00343 863 Pfam Glycosyltransferase family 20 61 546 IPR001830 GO:0003824|GO:0005992
Gma05g00343 863 Pfam Trehalose-phosphatase 596 828 IPR003337 GO:0003824|GO:0005992
Gma05g00343 863 SUPERFAMILY HAD-like 593 839 IPR036412 -
Gma05g00343 863 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00343 Gma-Chr5 3188884 3191809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00343 1 850 Trehalose Biosynthesis Gene Families AT1G23870 64.671 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00343 K16055 - gmx:100808800 1751.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00343 05 3188884 3191809 Gma05g00343 05 3188884 3191809 ECH
Gma05g00343 05 3188884 3191809 Gma04g01756 04 47032141 47035194 PCT
Gma05g00343 05 3188884 3191809 Gma06g01647 06 16324548 16331766 PCT
Gma04g01756 04 47032141 47035194 Gma05g00343 05 3188884 3191809 PCT
Gma06g01647 06 16324548 16331766 Gma05g00343 05 3188884 3191809 PCT