Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00337 atgtcccatgcttctttggagGGCACAGTGCTGTCCATCGCTGGAGCATTACTAGTGACCCTTTACAAAGGAAGTCCCATCATCAGCTTTCGAACTCAACCCTCGCCAACACAACCATTGCCACCTTTGTTGGCTGAAACCAGTAACTGGGTTATTGGAGGTCTCTTCTTTGCCACTGCCTCTATTTCTCTTGCAGCCTGGAATATTACACAGGCAGCAATTCTGAAAGGATATTCATCTCAGTTAACCATATTAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGATCCAAATGACTGGAAAATAAGCCCTGACATTGATCTCATCGCTGTATTCTATTCAGCTGTTGTGGGAAGTGTGGTGACATTTTCTGTAAACACTTGGTGCATTAAAAAGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGACTGTTGTCTTCCTTGGTGAAACACTCCATGTTGGCAGTGTTGTTGGTGCAGTGATAATTGCCATCGGATTTTACACAGTATTGTGGGCACAATCAAAAGGGGAAAACGCAAAAGGCTTCCAAGTTGATGGACTGTCATCCCCGTCTGCCCAAGCGAGTCCTCTACTCGAGTTCCATGAAAGCAATGTTTTAGCATAA 684 0.4298 MSHASLEGTVLSIAGALLVTLYKGSPIISFRTQPSPTQPLPPLLAETSNWVIGGLFFATASISLAAWNITQAAILKGYSSQLTILAYYCLFGTIQSAILSLIVVRDPNDWKISPDIDLIAVFYSAVVGSVVTFSVNTWCIKKKGPVFVSLFKPVGIAIAAFSTVVFLGETLHVGSVVGAVIIAIGFYTVLWAQSKGENAKGFQVDGLSSPSAQASPLLEFHESNVLA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00337 227 PANTHER WAT1-RELATED PROTEIN 4 218 IPR030184 GO:0016021|GO:0022857
Gma05g00337 227 Pfam EamA-like transporter family 52 190 IPR000620 GO:0016020|GO:0016021
Gma05g00337 227 PANTHER WAT1-RELATED PROTEIN 4 218 - -
Gma05g00337 227 SUPERFAMILY Multidrug resistance efflux transporter EmrE 110 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00337 Gma-Chr5 3134995 3136508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00337 2 221 Nodulin-like Gene Family AT5G40240 36.771 5.52e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00337 - - gmx:102659936 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00337 05 3134995 3136508 Gma17g00862 17 7306326 7313965 ECH
Gma02g00286 02 2987304 2991039 Gma05g00337 05 3134995 3136508 ECH
Gma05g00337 05 3134995 3136508 Gma05g00337 05 3134995 3136508 ECH
Gma17g00862 17 7306326 7313965 Gma05g00337 05 3134995 3136508 GST