Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00336 ATGGGAGTGAAACGCAATTTGGTGGAATGGACTCCATTCATAGCGATGGCGACTGTGGAGTGCCTTGACGTGGAGCTGTCCACGTTGAGTAAAGCAGCCATGTCAAGAGGAATGAACCACTTCGTTCTTGTTGGCTACTCCAATGCTCTCGCAACTCTCATACTCCTCCCTTCCCCTTTCTTCATAGACACACAAAGGAAATTATTAGTTCTTATTAGGTTGTTTGTTGTAAGTAGGAATCACAAAACAAGACCATCCCTCTCTTTCTCGCTTCTCTGCAAGTTCTTCCTCCTCGGCATTCTTGGCTTAACTGTCATGCAGAATTGTGTTTTCACCGCCATTGACTACAGCTCTGCCACTCTTGGATCCACTACGAGCAATTTGTCTCCAGCAATCACTTTTGTGCTAGCGAAGTTGAAAATTGGAAGCTCAATAAGCAAGATCAAGGTCATCGGCGCAGTGCTGTCCATCTCTGGAGCATTAGTTGTTACCCTTTATAAGGGTAGTTTTATCATCACCTTTCGAATTCAACCATCTTTGTTGGATGAAACCAGTAACTGGGTCATTGGGGGTCTCGTATTTGCCATTGCCTCTGTTTCTTTTGCAGCCTGGAATATTACTCAGGCAGTAATTCTGAAAGAATATTCATCTCAATCAACCATAATAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGAAATACTTTCTCTCTTTGTAGTCAGAGATTCAAATGTATGGAAAATAAGCCCCAACGATAAGCTCATCTGTATATTCTATTCAGCTATTGCAGGAAGCGCGGTGACATTTTCTGTAACGGCATGGTGCATAAAAAGGAAAGGACCTGTATTTGTTAGCATGTTCAAGCCTGCAGGGATTGCTATTGCTGCCTTTTCGAGTGTTGTCTTCCTTTGTGAAACACTCCATTTTGGCAGTGATAATCGCCATCGGACTGTACACATTATTGTGGGCACAATCAAAAGAGGAAAACGCAGAAGACCTCCAAGTTGA 1011 0.4313 MGVKRNLVEWTPFIAMATVECLDVELSTLSKAAMSRGMNHFVLVGYSNALATLILLPSPFFIDTQRKLLVLIRLFVVSRNHKTRPSLSFSLLCKFFLLGILGLTVMQNCVFTAIDYSSATLGSTTSNLSPAITFVLAKLKIGSSISKIKVIGAVLSISGALVVTLYKGSFIITFRIQPSLLDETSNWVIGGLVFAIASVSFAAWNITQAVILKEYSSQSTIIAYYCLFGTIQSEILSLFVVRDSNVWKISPNDKLICIFYSAIAGSAVTFSVTAWCIKRKGPVFVSMFKPAGIAIAAFSSVVFLCETLHFGSDNRHRTVHIIVGTIKRGKRRRPPS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00336 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 88 167 - -
Gma05g00336 336 PANTHER WAT1-RELATED PROTEIN 9 312 IPR030184 GO:0016021|GO:0022857
Gma05g00336 336 PANTHER WAT1-RELATED PROTEIN 9 312 - -
Gma05g00336 336 Pfam EamA-like transporter family 29 164 IPR000620 GO:0016020|GO:0016021
Gma05g00336 336 Pfam EamA-like transporter family 190 310 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00336 Gma-Chr5 3130102 3132441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00336 12 333 Nodulin-like Gene Family AT5G40240 35.693 1.17e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00336 - - ccaj:109809148 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00311 01 3632798 3636825 Gma05g00336 05 3130102 3132441 ECH
Gma05g00336 05 3130102 3132441 Gma05g00336 05 3130102 3132441 ECH