Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00333 ATGTGGAAATCCCCCACGCGTGCCCACTCTAGTGTAACCGTTGAtttttcttcttcttcttcttcttcttcttcttcttcttcttcgttgaagtcttcaGTTGATTGGTTTTATAAGGATGGTCGCAAAATTATTGCTGGTGACTGTGCTCTCTTCAAACCACCTAAAGACCGCCCACCTTTCATTGGAATAAGTCATCGTGTGACAGTTGGTGTCGAGCTTCAATCAGGGATTTCTTCATTTATATGCAGGAGGGTTTATGATGTTCTGAACAGGTGTTTATGTTGGCTAAGTGATCAAGATTATATTGATGATTGTCAAGAAGAAGTAGATAAGCTAGTACATAGGACTTGTGTAGAAATGCAGCCAGGCGGTCGATCTCCTAAGCCAGTGAGCAGTCCAACATCAACATCACAGTTAAAATCTGGTTCAGATAGTGTCCAAAACAGTGTTTCTTCCTTTTCTTCTCATGTTAAGGGTAGGAAAAGGGAGAGGGTAGATCAAGGGCAAGAATCTGTAAAGCGAGACCGTTCAACCAAAAATGATGATGGGGATTCTGGTAATTTTAAGGCGGATAGCATTTTGAAGACAGAGATTGCCAAAGTAACAGAAAAGGGGGGTCTTATTGATCCTGAAGGGGTTGAGAAATTAGTGCAGCTGATGGTTCCTGATGGAAATGAGAAAAAGATTGATTTAGCTAGCCGGTCAATGCTTGCAGCTGTAATTGCAGCAACCGAGAAATTTGATTGCCTTAGTCGGTTTGTGCAACTAAAGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGCACATAAAGGGAAGCTTGGTGAGGGTATTGGGTCTAGGGATGGTGATAAATCTGTTGATGACTTTCTTTTTGTATTACTCCGAGCACTAGATAAGCTTCCAGTAAACCTTCAGGCTCTACAAGCTTGTAACATTGGTAAATCTGTGAATCATTTGCGAACTCATAAAAACTTGGAAATTCAGAAGAAAGCCAGGGGTTTAGTTGACACATGGAAAAAACGTGTTGAAGCTGAAATGATTATAAATGATGCTAGGTCTTGTTCAGTTCAGACTGTCCCCTGGCCAGCCAGACAACGACTTTCTGAAGTTGCTCAAGGTGGGAATAAACATTCAAGTGGGTCAGCTGATGTTGCCATGAAGAGCTCAGTTACACAGCTTTCTGCATCCAAAACTGCCTCTCCGAAGATTGCCCCAGGAGAGAATACTACAAGATCTACATCTGCATCTCCAGGGTCTACGAAATCAGTGCCTTCACCTGCACCCGCAACCGCAAACTTGAAAGATGGACAGCCCCATGCTGCAGCTGTTAGTGGTTCATCTGATCTTCCTGTGGCAAATGCAAGGGATGAGAAAAGTAGCAGTTCTAGTCCATCTCATAACAGTCAATCTTATTCAAGTGACCATGCCAAAGCTGGGGGTTTCTCAGGAAAGGAGGATGCCAGGAGCTCTACTGCAATGAGTGTGAATAAGGTATCAGGAGGCTCTTCACGGCACCGAAGATCTATGAATGGATTTCCGGGTTCAACTCCATCTAGAAGGCAAAGGGAAACTGGATCGAGCAGAAATTCCTCACACAAGAATTTAATTTCAGAGAAAATATCTCAATCTGGATTAAGGGAAAAAGCAAATGATGGAACTCTTCTTGAGGGGCATACTCCGAAGCTGATTGTTAAGATCCCAAACCGAGGTCGAAGTCCTGCACAAAGTGCCACGGCAGGTTCTTCTGATGATCCTTCAATCATGAACAGTCGAGCTTCATCTCCTGCTCTTTCAGAGAAGCATGATCAGTTTGATCGCTGCTCAAAGGAAAAGAGTGATTTTTATCGAGCTAATATTGGTGCAGACATTAATACAGAATCGTGGCAGAGTAACGATTTCAAAGATGTATTGACTGGTTCTGATGAGGGTGATGGATCACCAGCAGCCATTACTGATGAACAGTGTAGGACTGGTGAGGATTGTAAGAAAGTATCAGATGTATCTAAGACAACTTCTTCATCACCTGGGAGTGAGAGTAAAGCCAGGAATTTGCAGGATGCTTCATACAGCTCCATCAATGCTCTTATTGAAGGTGTTAAGTACACTGAAGCTGATGATGTTGGAATGAATCTTCTTGCTCGTGTGGCTGCTGGAGAGATCTCAAAATCTGAATCGGGAATGCCAGCTGGATCCCCTAAAAAAAACACCACTACAATTGAACAGTCATATGCAGGTAATGCTGCAGTAGTCAAGTCCTCTGAAGAGTATCTTGTTCAGGATAAGTGCTACTCTAATGCTGAACATATGAAGCAGGATTCTAGATCTGGTGATTTTGGGACAGATGATGATATTCGGGCATTTGAAGGGAAAGCTACAGGAGAACACAATCCATCTAGTATGGATTTACAGGTTACTGAAACTAGTTTAGAAAGCAAAGGAAAATTAATTGTAAAATCATCTGGTACATCTGCTGGCATTCCTGAAAGCACCTTCCAAGAAGTCAGAGATATTGACTCTAGCAAACTGGTAAAGGAAAAGAAGGTTGTTGTGAGAGTGGATGCTGTCAATAATGTTGATGAGGTCAATGTTGTTGCAAGAGAAGGTGAAACAGAGGCAATTGAAAAATTGTCACACACCTGTGAAGAAGTTGATGTCAAGTGTGATAACCATGCTTCTGAAGGACTAAGCTGTGACAAAGAGACAGCTGGCAAGTCTCCTGCCACTTGTGTGCCCTCTGACTCTGTAAAAGCGACAGATGAGAATGCGCTCCAATCATCTGGTTACATTGTTGATAAGGTTCCTGAATACCTAAATGAAAGGGAATCTGAAAAAAATGATGATATGGCTGCTCAGGATCATGCTAAGCAGTCTTTGAAGCAAAAAAATGAGTCTGAAAATGATGCTATTATGGTGCCCGAGAACAGAGGTTTATGTTCAGGTGCAACTGGTCTTGATGCTGAATATGTGGAAGAGAATTCAGGTACAAAAGAGGTTTGTGACCAAGATGCAGGAGCAGGACAGATACTGCACACAGATTTACCTAGCTTTCCTTCACGAGAAATGGATCAGCATTCAGGTCAAAGGGATTCAAAATTGGCTGCCATGGAATCAGAGGAAGCAGAGGAATGCACCTCTACCACTGGAGATGCCTCTTCTGCATCTGTTGCTGGTGTCTCAGAAGTGGACACAAAAGTTGAATTTGATTTAAATGAAAGGCTCAATGCAGATGACGGGAAATGTAGTGAGATACCTGGGTCTACACCTGCTGCAAGATTGGTCAGTCCTGTTCCATTTTCTGCTTCATCCATGTCTTTTGGTATTCTCTCGATCACAGTGGCTGCTGCTGCTGCAGCAAAGGGCCCCTTTGTGCCACATGAAGATTTATTGAAAAGTAAAAAGGAGCTTGGTTGGAAGGGATCCGCTGCTACTAGTGCATTTCGGCCGGCTGAGCCCAGGAAAGTTATGGAAATTCCTCTTGATATGTCTACTACCCCTATTCCTAATGATGAAGCTAGAAAGCAGAGTCGGGTACCATTGGATTTTGACTTGAATGTTTCCGATGAAATAATACTTGATGATCTTTCTTCTCAGAACTGTGCTCGTCAGACTGATTGTGTAACTCGTTCAGATGATGGGCATGATCCAAATAAATCAATGGCCTCACATGTTCGTTGTTCAGGAGGACTAGGTCTTGACTTGAACCTAGTGGATGGAGCTTCTGACGTGGGCAATTGCACCTTAAGCAGTAGTCATAAAATGGATGTACCACTTACGCAGTTTAAATCAGCCGCCAGTGGTCCTCCAAATGGAAAGATGAGTGTCCTTAGGGATTTTGATCTGAATGATGGACCTATAGTTGATGAAGTCACCACTGAACATTTGATGTCCACACGATCTGCCAGGAATAGTGTACCATCTCAACCTCCTATTTCTGGACTTAGGATGAGTAATGCAGAAGTAGGCAACGTCTCTTCATGGTTTCCTTCCACTGGGAACACCTATTCAGCCGTAACAATATCTTCAATTATGTCTGATAGAGGTGATAAGCCATTTTCAATTGTTGCCCCTAATGTGTCAGAAAGGGTGTTGGGTCCTGCAACTGGCAGCAACCCATTTGGACCTGATATTTATAGGGGGGCAGTTTTGTCATCTTCTCCCGCAGTGCCATATCAATCTGCACCATTTCAGTATCCTGTCTTCCCTTTCAATTCCAGCTTTCCTCTTCCATCAGCATCATTTTCTGGTGGATCAACTCCTTATGTAGATACAACTTCAGGAGGGAGGCTTTGCTTCCCTGTAGTAAATTCACAGCTTATAGGTTCTGTTGGTAATGTTTCAGCCCATTACCCCAGGCCTTACGTTGTTAGTTTCCCAGATGGTAGCAATAGTAGTGGTGCTGAGAACAGTAGGAAAAGGGCAAGGCAGGGTTTAGATCTTAATGCTGGACCTGGTTCAGACTTAGAGGGGAGAGATGAGAGCTCACCTCTTGTACCACGGCAACTTTCTGTTGCTAGTTCACAGGCCCAACTTGAAGAGCAAGCAAGGATGTTTCACTTAAGCAGTGATGTTCTTAAAAGGAAGGAACCCGATGGGGGGTGGGATGGCTACAAGCAATCATCATGGCAGTACCATAATTTGTAA 4647 0.4291 MWKSPTRAHSSVTVDFSSSSSSSSSSSSSLKSSVDWFYKDGRKIIAGDCALFKPPKDRPPFIGISHRVTVGVELQSGISSFICRRVYDVLNRCLCWLSDQDYIDDCQEEVDKLVHRTCVEMQPGGRSPKPVSSPTSTSQLKSGSDSVQNSVSSFSSHVKGRKRERVDQGQESVKRDRSTKNDDGDSGNFKADSILKTEIAKVTEKGGLIDPEGVEKLVQLMVPDGNEKKIDLASRSMLAAVIAATEKFDCLSRFVQLKGLPVFDEWLQEAHKGKLGEGIGSRDGDKSVDDFLFVLLRALDKLPVNLQALQACNIGKSVNHLRTHKNLEIQKKARGLVDTWKKRVEAEMIINDARSCSVQTVPWPARQRLSEVAQGGNKHSSGSADVAMKSSVTQLSASKTASPKIAPGENTTRSTSASPGSTKSVPSPAPATANLKDGQPHAAAVSGSSDLPVANARDEKSSSSSPSHNSQSYSSDHAKAGGFSGKEDARSSTAMSVNKVSGGSSRHRRSMNGFPGSTPSRRQRETGSSRNSSHKNLISEKISQSGLREKANDGTLLEGHTPKLIVKIPNRGRSPAQSATAGSSDDPSIMNSRASSPALSEKHDQFDRCSKEKSDFYRANIGADINTESWQSNDFKDVLTGSDEGDGSPAAITDEQCRTGEDCKKVSDVSKTTSSSPGSESKARNLQDASYSSINALIEGVKYTEADDVGMNLLARVAAGEISKSESGMPAGSPKKNTTTIEQSYAGNAAVVKSSEEYLVQDKCYSNAEHMKQDSRSGDFGTDDDIRAFEGKATGEHNPSSMDLQVTETSLESKGKLIVKSSGTSAGIPESTFQEVRDIDSSKLVKEKKVVVRVDAVNNVDEVNVVAREGETEAIEKLSHTCEEVDVKCDNHASEGLSCDKETAGKSPATCVPSDSVKATDENALQSSGYIVDKVPEYLNERESEKNDDMAAQDHAKQSLKQKNESENDAIMVPENRGLCSGATGLDAEYVEENSGTKEVCDQDAGAGQILHTDLPSFPSREMDQHSGQRDSKLAAMESEEAEECTSTTGDASSASVAGVSEVDTKVEFDLNERLNADDGKCSEIPGSTPAARLVSPVPFSASSMSFGILSITVAAAAAAKGPFVPHEDLLKSKKELGWKGSAATSAFRPAEPRKVMEIPLDMSTTPIPNDEARKQSRVPLDFDLNVSDEIILDDLSSQNCARQTDCVTRSDDGHDPNKSMASHVRCSGGLGLDLNLVDGASDVGNCTLSSSHKMDVPLTQFKSAASGPPNGKMSVLRDFDLNDGPIVDEVTTEHLMSTRSARNSVPSQPPISGLRMSNAEVGNVSSWFPSTGNTYSAVTISSIMSDRGDKPFSIVAPNVSERVLGPATGSNPFGPDIYRGAVLSSSPAVPYQSAPFQYPVFPFNSSFPLPSASFSGGSTPYVDTTSGGRLCFPVVNSQLIGSVGNVSAHYPRPYVVSFPDGSNSSGAENSRKRARQGLDLNAGPGSDLEGRDESSPLVPRQLSVASSQAQLEEQARMFHLSSDVLKRKEPDGGWDGYKQSSWQYHNL 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00333 1548 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 249 348 IPR035441 -
Gma05g00333 1548 SMART TFS2_5 267 346 IPR003617 GO:0005634
Gma05g00333 1548 MobiDBLite consensus disorder prediction 1461 1510 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 128 156 - -
Gma05g00333 1548 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 71 1544 - -
Gma05g00333 1548 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 70 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 370 610 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 669 686 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 942 971 - -
Gma05g00333 1548 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 214 348 IPR035441 -
Gma05g00333 1548 CDD TFIIS_I 269 345 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 157 189 - -
Gma05g00333 1548 ProSiteProfiles TFIIS N-terminal domain profile. 270 347 IPR017923 -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 942 970 - -
Gma05g00333 1548 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 70 - -
Gma05g00333 1548 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 71 1544 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 121 190 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 573 599 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 455 478 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 373 429 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 1 31 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 489 550 - -
Gma05g00333 1548 MobiDBLite consensus disorder prediction 664 686 - -
Gma05g00333 1548 Pfam TFIIS helical bundle-like domain 295 344 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00333 Gma-Chr5 3108841 3114757 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gma05g00333 Med26 3.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00333 - - gmx:100806155 2696.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00333 05 3108841 3114757 Gma17g00865 17 7329490 7335694 ECH
Gma05g00333 05 3108841 3114757 Gma05g00333 05 3108841 3114757 ECH