Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00309 ATGAAAGCCCAGAGAGATATTCTCACCAAAGTCCTTCACCCTTTCATCACCAAATCTAAGTTGTATTTGGTGTTGGACTTCATTAATGGGGGGCATCTCTTCTTTCAATTATATCGCCAGGGTATCTTCAGTGATGATCAGACAAGGCTTTACACTGCTGAGATAGTATCTGCTGTTTCACCCCTTCACAAAAATGGCATCGTGCATCGAGATCTTAAGCCCGAAAACATTCTTATGGATGCTGATGGGCATGTCATGCTAATTGATTTTGGACTGTCAAAAGAGATTGATGAATTGGGAAGATCTAACTGTTTTTGTGGGACTGTAGAATACATGGCTCCAGAAATCCTACTGGCTAAAGGCCATAATAAGGATGCAGATTGGTGGAGTGTTGGTATTCTGTTGTATGAAATGCTAACAGGGAAGGCACCAAAACACAATAACAGAAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTAAAACTTCCACCATTCCTTACCAGTGAAGCTCACTCTTTGCTCAACGGATTGCTACAAAAGGATCCATCGACAAGGTTAGGCAATGGGCCAAATGGAGATGATCAGATCAAAAGTCATAAATGGTTTAGGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAACTGGAACCAAATTTCAAACCAGACGTGTCTGCAAAAGATTGTACAGCTAATTTTGACCAATGTTGGACAGCAATGCCTGTTGATGACTCGCCGGCACCCACGCCTACAGCAGGTGACCATTTCCAGGGCCTTGGCTTTCATCTAGCAACCCAAATCTTCTGA 807 0.4176 MKAQRDILTKVLHPFITKSKLYLVLDFINGGHLFFQLYRQGIFSDDQTRLYTAEIVSAVSPLHKNGIVHRDLKPENILMDADGHVMLIDFGLSKEIDELGRSNCFCGTVEYMAPEILLAKGHNKDADWWSVGILLYEMLTGKAPKHNNRKKLQEKIIKEKVKLPPFLTSEAHSLLNGLLQKDPSTRLGNGPNGDDQIKSHKWFRSINWKKLEARELEPNFKPDVSAKDCTANFDQCWTAMPVDDSPAPTPTAGDHFQGLGFHLATQIF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00309 268 SUPERFAMILY Protein kinase-like (PK-like) 9 254 IPR011009 -
Gma05g00309 268 SMART pkinase_C_6 204 263 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma05g00309 268 ProSiteProfiles AGC-kinase C-terminal domain profile. 204 268 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma05g00309 268 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00309 268 Gene3D Phosphorylase Kinase; domain 1 5 245 - -
Gma05g00309 268 Pfam Protein kinase domain 9 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00309 268 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 262 - -
Gma05g00309 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 67 79 IPR008271 GO:0004672|GO:0006468
Gma05g00309 268 SMART serkin_6 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00309 268 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 262 - -
Gma05g00309 268 Gene3D Transferase(Phosphotransferase) domain 1 28 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00309 Gma-Chr5 2840772 2843880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00309 1 252 AGC Kinase Gene Family AT3G08720 68.077 3.78e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Gma05g00309 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00309 K04688 - gmx:100800825 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00892 17 7560012 7564243 Gma05g00309 05 2840772 2843880 GST