Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00303 ATGGCCAACGGATCCCCTCCTTCAGTTCCCGGCCAACGATCCTCGCCGGAACCCAATCCTCCGAACCATGTCTCCGATTCGAAGGAGGAAACCGCCGCCGCTCCTCCTCCGCCCACCACCAGGAGCACCCGCCCCTCCCGCGCGTGCACCATGCGCGCCGCCTCTCGCCTCCATTCCTCGCCGGCGCCGGTAAAGAAGGAGGCGCCTGCGAAGAAGGAGGATTCGCCGCCACCGCCGCCGTCGCAATGCAGCAAGATCGTGACTCCGCTGGTGGAGCCACCGTCGCCGTCGCAGTTGCCGCGGTGGAACCTGCGGTCGATGTGGGAGTTCGCTTCCGTGCTGAATTTCATGCATCTGTTTAGGCCTCTTTTGAATATCTCGTTGGAATTCTCTGCAGAAGAGTTCGAGACAGCTCTTCTTACCCCCAACGAGACTTTGTTTCATATACATATGCCTTTGCTAAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGCGATACTTGGATAACCGTATTATGCAGGAAATTGAGAGATTGGTGGCATTGGGTTGCCGATGGGGATCTTCCAATTGTTGCTTCACATGGGGTGGAGATTGAAGAATATAAATCACTTGATCCAGGGGTCCGTGTTGTCATCTTAAAAGCATTATGTGACATTCGTGTGGAGCAAGAAGATATCCGAAGTTATATTGACAACTCAATTAAACACGGTGTTCAGCTTTCAACATTCCGTAAAGAGCGTATTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCCATTATTGGTCATAGGTTGTATCGAGAAAAAAGGAAAACTGAAGTGGTTCAAATGAAGAAAGGGAAACCAAGAGGTTCCCAGGTTCTTTCTAATACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAATTTGAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGGCTTCCATGGGAAAAAAGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCACAAGAAAAAGGAGAAGTTGCTGAAAAAGCAACACAGACAAGCTCTTCTGCTTGAGAATTACTTGGTTGTTGACGGGCTTGGTCCTGGGCGTTCTCTTCGTGACAGGAAACCTGTTACCTACACTTTTGATGATTATGATCGGTCAATCAATGAGGCAATTAAAGTAACCAAGCAGAAACAGCCATCTCCAGAATGTATGCCCAGGAGAGAATCAGTAGCAAAAGCTGAAGCTTTGTCTAATGGTAAATATGGTCCTCCACATGCCACACAAGATCGGAATTTTGGTATACCATCTCCAGAATCATCTGATTCTGATGATGACAAAGAAGATAATGAAACTGACAACTTGGATCGAAGCAATCGTCAAAGACGGAGACCTAAACGGTATTCAGAAAGAGAGTTTGTTGAAGCAGTATCAGATAATGAGGCAGACTTCGACAGTGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCAAGAAACGCAAGCAGAAAAGGATGTCTTCTAGTAGCTCTGAAGGAGATGAAGAATATCAGTGGGACGAATACAATGTTGAAGATGAAGAAGAAGAAGATGATGACGACGATGACGATTCCTTGAGCATCAGTGAGGATAGTGACAAGCCTCGTAAGGTCAAACAGCTGCAGTTGCATGGTCGTACAAGGAGAGAAACCAAACTCAGGTCTGTGGGTGAGATACAATCGGGTCTAAGACGTAGTAAGAGGGCAACTAAAAATCGTATAAATTACCGACAATGTGAGGTATCAGAATCAGAAACAGAGTTTATCAAATCTGAGAAGTCTAATTCATCAGCTGATCACTCAGATCCCAATGAGAATGGTGAATACATGATGGAAAGTGAAGATTCAGATGACAGTGATAATGAAGAACAAGAAATGAAAGTAGATGACCCTGTTACATATCCTGCAGTAGAAGAGAATGAACAAAACCAGCCTCCTGAAAAATTAAGTAGTCCTGGTCAGGAGGAAGTTGAGAGCAGCACAGGAAAGAGACGCTTCCTTGATTTGAATGAGCTTGCCCCTAGCACTGGTTTCGATGATGGTCCGAACACAATAATGAAAGATGAAGACAATGATTACTGA 2148 0.4511 MANGSPPSVPGQRSSPEPNPPNHVSDSKEETAAAPPPPTTRSTRPSRACTMRAASRLHSSPAPVKKEAPAKKEDSPPPPPSQCSKIVTPLVEPPSPSQLPRWNLRSMWEFASVLNFMHLFRPLLNISLEFSAEEFETALLTPNETLFHIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGVEIEEYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSIKHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYREKRKTEVVQMKKGKPRGSQVLSNTSYQWEAVATNFDEFEDVSEKLFSSKNRTEASMGKKLKIDMLPEIEKVHKKKEKLLKKQHRQALLLENYLVVDGLGPGRSLRDRKPVTYTFDDYDRSINEAIKVTKQKQPSPECMPRRESVAKAEALSNGKYGPPHATQDRNFGIPSPESSDSDDDKEDNETDNLDRSNRQRRRPKRYSEREFVEAVSDNEADFDSDDDIVGEAVYDEEYLKKRKQKRMSSSSSEGDEEYQWDEYNVEDEEEEDDDDDDDSLSISEDSDKPRKVKQLQLHGRTRRETKLRSVGEIQSGLRRSKRATKNRINYRQCEVSESETEFIKSEKSNSSADHSDPNENGEYMMESEDSDDSDNEEQEMKVDDPVTYPAVEENEQNQPPEKLSSPGQEEVESSTGKRRFLDLNELAPSTGFDDGPNTIMKDEDNDY 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00303 715 MobiDBLite consensus disorder prediction 501 520 - -
Gma05g00303 715 MobiDBLite consensus disorder prediction 551 577 - -
Gma05g00303 715 MobiDBLite consensus disorder prediction 458 484 - -
Gma05g00303 715 MobiDBLite consensus disorder prediction 1 95 - -
Gma05g00303 715 MobiDBLite consensus disorder prediction 400 715 - -
Gma05g00303 715 MobiDBLite consensus disorder prediction 600 621 - -
Gma05g00303 715 MobiDBLite consensus disorder prediction 523 550 - -
Gma05g00303 715 MobiDBLite consensus disorder prediction 659 679 - -
Gma05g00303 715 PANTHER REMODELING AND SPACING FACTOR 1 19 714 IPR028938 GO:0006355|GO:0031213
Gma05g00303 715 MobiDBLite consensus disorder prediction 485 500 - -
Gma05g00303 715 MobiDBLite consensus disorder prediction 630 647 - -
Gma05g00303 715 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 19 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00303 Gma-Chr5 2770840 2779869 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gma05g00303 WHIM1 5.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00303 - - gmx:100795519 1316.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00303 05 2770840 2779869 Gma05g00303 05 2770840 2779869 ECH
Gma17g00898 17 7632084 7640318 Gma05g00303 05 2770840 2779869 GST
Gma05g00303 05 2770840 2779869 Gma04g01706 04 46243911 46254461 PCT
Gma05g00303 05 2770840 2779869 Gma06g01686 06 16850669 16859261 PCT
Gma04g01706 04 46243911 46254461 Gma05g00303 05 2770840 2779869 PCT
Gma06g01686 06 16850669 16859261 Gma05g00303 05 2770840 2779869 PCT