Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00293 ATGGAAATGGGGACTGTAGCATGGATTTTCTTGGTGATTATGGTCACATTTTTCTGCCCTTCCTCTCTTGCTCTCACTCAGGATGGTATGGCGTTGTTGGAAATCAAAAGCACTTTGAATGATACTAAGAATGTTCTGAGCAACTGGCAAGAGTTTGATGAATCTCCTTGTGCATGGACTGGTATCTCTTGTCACCCTGGTGATGAACAAAGAGTTCGCTCAATAAATCTGCCATACATGCAACTTGGAGGGATTATATCTCCCAGCATTGGTAAACTCAGTAGACTACAGAGATTGGCACTTCATCAGAACAGCTTGCATGGAACCATTCCTAATGAACTTACCAATTGTACTGAGCTAAGAGCACTGTACTTGAGGGGTAATTATTTCCAAGGAGGCATACCATCAAATATTGGAAATCTTTCATATTTAAATATACTGGATTTATCAAGCAACTCATTAAAAGGTGCTATACCTTCCTCTATTGGCCGTCTCTCACATTTGCAAATTATGAACTTGTCTACCAATTTCTTTTCTGGTGAAATTCCCGACATTGGAGTATTAAGCACCTTTGACAAGAGCTCGTTCATTGGCAATGTAGATCTTTGTGGGCGACAAGTCCAAAAGCCATGTCGGACATCATTTGGTTTCCCTGTGGTGCTACCACATGCTGAAAGTGATGAAGCTGCAGGCAAACCTTCACATTACATGAAGGGGGTGCTTATTGGTGCAATGGCAATTTTGGGTCTCGTACTTGTCATAATCCTTTCATTCCTTTGGACTCGTTTGTTATCAAAGAAGGAACGAGCAGCAAAGAGATACACAGAAGTCAAGAAACAAGTTGATCCAAAAGCAAGCACAAAACTTATTACCTTCCATGGTGATCTACCATACACATCATCTGAGATCATAGAGAAGCTGGAGTCTCTTGATGAAGAGAATCTAGTAGGATCAGGAGGATTTGGTACTGTTTACCGAATGGTGATGAATGACTGTGGTACATTTGCTGTTAAGCAGATTGATCGAAGTTGTGAAGGGTCTGATCAAGTGTTCGAAAGGGAACTAGAGATCCTCGGGAGCATCAAGCACATAAATTTAGTAAATCTGCGTGGTTACTGCAGGCTCCCTTCTTCAAGGCTCCTTATCTATGACTATGTAGCCCTTGGCAGCTTAGATGATCTCTTGCATGAAAATACTCAACAAAGACAACTATTGAATTGGAATGATCGCCTAAAGATAGCTCttggttctgcccagggtttggcatacctgcaccatgaatgcagcccaaaagttgttcattgtaacataaaatccagcaacatactgcttgatgaaaacatggagcctcatatatctgattttggtcttgcaaagctttTGGTTGATGAAAATGCCCATGTTACCACAGTGGTTGCAGGCACATTTGGTTATTTGGCACCTGagtatctacaaagtgggagagcaactgagaagtcagatgtatatagctttggagttctattgctggaacttgtaacaggaaagaggCCTACAGATCCTTCCTTTGTAAAAAGAGGTTTAAATGTTGTTGGTTGGATGAACACGTTACTGAGAGAAAACAGAATGGAGGATGTGGTTGACAAAAGATGCACTGATGCAGATGCAGGAACTCTTGAAGTAATTCTTGAGCTGGCTGCAAGATGCACCGATGGAAATGCAGACGATCGTCCTTCAATGAACCAGGTGTTGCAGTTGCTGGAACAAGAGAAGTACAATGTGTTCATGGCCCAAATAGGCTGTGCTGCAATTGGAGTTTTGGCATTGACAATATTTGGACCTGGATGGCTGGCCAGGAGTGCTAGTATTGGAGCCTCCGTTGCTTACATGATCATCACAAATCCCGTTCACCCCCCAGCAAGAGATGGTTGTATACTCGAAGAAAAATTTCAAATTTTGACCACTGCTCTGCACATTGATACATCTCTTCTGCTGTCTCTTCTAATTTAA 1989 0.3731 MEMGTVAWIFLVIMVTFFCPSSLALTQDGMALLEIKSTLNDTKNVLSNWQEFDESPCAWTGISCHPGDEQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGTIPNELTNCTELRALYLRGNYFQGGIPSNIGNLSYLNILDLSSNSLKGAIPSSIGRLSHLQIMNLSTNFFSGEIPDIGVLSTFDKSSFIGNVDLCGRQVQKPCRTSFGFPVVLPHAESDEAAGKPSHYMKGVLIGAMAILGLVLVIILSFLWTRLLSKKERAAKRYTEVKKQVDPKASTKLITFHGDLPYTSSEIIEKLESLDEENLVGSGGFGTVYRMVMNDCGTFAVKQIDRSCEGSDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYVALGSLDDLLHENTQQRQLLNWNDRLKIALGSAQGLAYLHHECSPKVVHCNIKSSNILLDENMEPHISDFGLAKLLVDENAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLRENRMEDVVDKRCTDADAGTLEVILELAARCTDGNADDRPSMNQVLQLLEQEKYNVFMAQIGCAAIGVLALTIFGPGWLARSASIGASVAYMIITNPVHPPARDGCILEEKFQILTTALHIDTSLLLSLLI 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00293 662 Pfam HPP family 585 633 IPR007065 -
Gma05g00293 662 PANTHER LRR RECEPTOR-LIKE KINASE 2 583 - -
Gma05g00293 662 SUPERFAMILY Protein kinase-like (PK-like) 292 582 IPR011009 -
Gma05g00293 662 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Gma05g00293 662 Gene3D Ribonuclease Inhibitor 25 213 IPR032675 -
Gma05g00293 662 Gene3D Transferase(Phosphotransferase) domain 1 387 593 - -
Gma05g00293 662 Gene3D Phosphorylase Kinase; domain 1 270 385 - -
Gma05g00293 662 PANTHER RECEPTOR-LIKE PROTEIN 55 2 583 - -
Gma05g00293 662 Pfam Protein kinase domain 312 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00293 662 ProSiteProfiles Protein kinase domain profile. 310 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00293 662 SUPERFAMILY L domain-like 25 185 - -
Gma05g00293 662 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00293 Gma-Chr5 2638434 2646149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00293 7 583 Receptor kinase-like Gene Family AT2G35620 48.007 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Gma05g00293 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00293 - - gmx:100797653 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00293 05 2638434 2646149 Gma05g00293 05 2638434 2646149 ECH
Gma17g00908 17 7757779 7762350 Gma05g00293 05 2638434 2646149 GST