Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00281 ATGGAGCTTGCTTCGGAGAGATCTGGTGATGGAGGTATTGGACTCAAGGAAGAAGATAGTGCTGGTGATGATGATGGTCATCATAAACAAGAGATTATTGTCGAGGAACCACCCGTGACTAATACCGAAAGTTCCATACTGGAGGCTCCGCCTAGCACATCCCCAAACAAAAAAGAAGAGGTTGTTAATCAGCTTGAGACTGCCAAAGCTGAAATGGGTGTAGCGAGAGAAGAAAATCAACTGCTAAAGACGTGTTTGAACAAAATAATGAATGAATATCGGACACTAGAGATGCAATTTCAGGATATACTAAAGCAACAAGGGACAAAAAAGAACGCTGATAAAGGAAATGATGATAAGCATGAAGAAATATTAGAGGAAGCGGATCTTGTTTCCCTCTGCCTTGGAAGAGTTCCAAGAAGTGATGAGAAAATCAAAGTTTCTAATAAGCCATTGAAGGATGATGAAGGGTTGACTCTTGGACTAGAGTGCAAATTTGAAACATCAAAGTCAGGAAGCACAAATGAAGCTTTACCTAATAATCCAAGCCCAGAAAATAGTTGTGAAGTAGTACCAAAGGAAGAAGGTGGGGAAAGTAAGGAGGCACTAAAGACAATGAGATCAGACACAGAGGATGAAGTTGCTCAGCAAAATCCTACAAAGAAACCTCGAGTTTGTGTTAGAGCAAGATGTGACACTCCAACAATGAACGACGGATGCCAATGGAGGAAATATGGACAAAAGATTTCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACAATTGCACCATCATGCCCAGTTAGAAAACAGGTGCAAAGATGTGTTGACGACATGTCCATTTTATTCACCACTTACGAGGGAACCCACAACCACACTCTTCCACCATCAGCTACTGCTATGGCATCCACAACTTCCGCAGCTGCATCCATGTTATTGTCTGGTTCATCAACCTCTAACTCTGCCTCAATACCTTCAACAGCAACCACAAATCTCCAAGGCCTCAACTTTTATCTCTCAGACGGTTCAAAACCAAGGCAACTATACCTCTCCAACCCTGCACTATCATCTTCACTTTCACATCCAACCATCACTCTCGACCTCACTACTTCACACCCTTCAGCCTCTTCCTCATCATCATCACCCTTTGTCAGATTCAATTCAAACTACAACAACAATCACCAACCCAGATACCCCTCTTCCTCATCAAGCCTAAGCTTCAGTACTAGTAATTCCTCCGAAATTGCTAATGCTATATCTTGGAGCAACGGCTTCCTCAACAATAATAGGAACATCCTTAGCAGTGTGAACTTTGGAAGACAACAAATGGAAAACATGAACCAGTCCTACATGCAAAAGAACAACAACAACACAAGCCTTCTTCCTCAAGCTGATACTATATCTGCAGCAACGAAAGTGATCACAGCGGACCCCGCTTTTCAGTCAGCTTTGGCAGCAGCACTTACTTCGTTTATTGGCGGTGGTGGTGTTGGAAACACGCGAGGAAGTCAAGGTGGTAATGTTGTTGGAGAAAGTTTGAGTTTGGGTCAGAAAATGAAATGGGGTGAGGTGTTTCCAGCGTCTAATAATTCTAATTCTTCAATTTCGAACAATAAAGTCAATGGTTGTGCATCCAGCTTCTTGAACAAAACGCCGGCAGCGAATACACAGACGAAAAATTTGATGTTTCTGCCGCCGTCGTCATTGCCGTTTTCTTCTACTCCCAAAAGTGCATCTGCATCTCCTGCTGCTGATAATAGCGACACCACCACCAATTGA 1785 0.4303 MELASERSGDGGIGLKEEDSAGDDDGHHKQEIIVEEPPVTNTESSILEAPPSTSPNKKEEVVNQLETAKAEMGVAREENQLLKTCLNKIMNEYRTLEMQFQDILKQQGTKKNADKGNDDKHEEILEEADLVSLCLGRVPRSDEKIKVSNKPLKDDEGLTLGLECKFETSKSGSTNEALPNNPSPENSCEVVPKEEGGESKEALKTMRSDTEDEVAQQNPTKKPRVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTIAPSCPVRKQVQRCVDDMSILFTTYEGTHNHTLPPSATAMASTTSAAASMLLSGSSTSNSASIPSTATTNLQGLNFYLSDGSKPRQLYLSNPALSSSLSHPTITLDLTTSHPSASSSSSSPFVRFNSNYNNNHQPRYPSSSSSLSFSTSNSSEIANAISWSNGFLNNNRNILSSVNFGRQQMENMNQSYMQKNNNNTSLLPQADTISAATKVITADPAFQSALAAALTSFIGGGGVGNTRGSQGGNVVGESLSLGQKMKWGEVFPASNNSNSSISNNKVNGCASSFLNKTPAANTQTKNLMFLPPSSLPFSSTPKSASASPAADNSDTTTN 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00281 594 MobiDBLite consensus disorder prediction 11 34 - -
Gma05g00281 594 ProSiteProfiles WRKY domain profile. 231 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00281 594 MobiDBLite consensus disorder prediction 170 187 - -
Gma05g00281 594 MobiDBLite consensus disorder prediction 37 61 - -
Gma05g00281 594 Pfam WRKY DNA -binding domain 237 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00281 594 MobiDBLite consensus disorder prediction 191 218 - -
Gma05g00281 594 SUPERFAMILY WRKY DNA-binding domain 229 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g00281 594 SMART WRKY_cls 236 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00281 594 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 47 588 - -
Gma05g00281 594 MobiDBLite consensus disorder prediction 371 408 - -
Gma05g00281 594 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 47 588 IPR044810 GO:0003700
Gma05g00281 594 MobiDBLite consensus disorder prediction 567 594 - -
Gma05g00281 594 Coils Coil 58 78 - -
Gma05g00281 594 Coils Coil 86 106 - -
Gma05g00281 594 MobiDBLite consensus disorder prediction 170 221 - -
Gma05g00281 594 MobiDBLite consensus disorder prediction 1 61 - -
Gma05g00281 594 Gene3D WRKY domain 221 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00281 Gma-Chr5 2533087 2538635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00281 72 572 WRKY Transcription Factor Family AT5G15130 39.885 1.42e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g00281 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00281 - - gmx:100793946 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00281 05 2533087 2538635 Gma17g00922 17 7867378 7873082 ECH
Gma19g00181 19 2218178 2221556 Gma05g00281 05 2533087 2538635 ECH
Gma02g00196 02 1870808 1877287 Gma05g00281 05 2533087 2538635 ECH
Gma01g00390 01 4785070 4790972 Gma05g00281 05 2533087 2538635 ECH
Gma18g01118 18 16214826 16219400 Gma05g00281 05 2533087 2538635 ECH
Gma05g00281 05 2533087 2538635 Gma05g00281 05 2533087 2538635 ECH
Gma17g00922 17 7867378 7873082 Gma05g00281 05 2533087 2538635 GST
Gma01g00390 01 4785070 4790972 Gma05g00281 05 2533087 2538635 PCT