Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00278 ATGCAACGTGAGCAGAGCAACAAACAAAGCAACTACAAAATTTATGCAGCTTTAGATCAATGTCTTTCTCTCTCTCTCTATCTGTCTCTTCCATGGAATGGTAGATTTGAGGTGAAGACGTTCCACATTGGTCAGGTCCCGATCtcacgatggggaaGCAGAGAGAAGCTTGTTAATCAAAAAGGAGTAGTAGTTACCTCCAAGGTGCCAGAAACTGGTTTGGCTTTAGAACCAACCTCCGATACTATTGCCAGACATGAGGAAGATCCAGAGCTGGAAAATAAAGAAGCAGAAAATGTTTTACCCGGGAATCAAGAAATAGACACAGTGGGATCAATTAATGAAGATGCTGCACTAGATCCAGAGAAAATGAGGCTGGAGGAAGCAGCTACAAAGGCACAAGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCTCTAAAAGGAATAATAAGGTTGCAAGCACTCATCCGTGGGCACTTGGTTAGGAGACAAGCTGTTGTTACATTATGCTCAATGTATGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAATAGTTAGACAGTCTAATGTTGGATCTGAAATCCATGAGAAGTCCAATATATTGAACCCTCTGGATGGCAAGCTTGTCAAGCCAAATGCTATGTTCACGAAAATTACCAAGCTGTCTGCAAATGCTTTCATTCGGAAGCTTCTTACTTCGTCAACTACAATAATGGCGCTGCGGTTGCAATATGTTCCCGGCGATCCAAATTCAGTCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTCACTTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCGAGATACTAAGTCTCAGAGAAAGCATGGCAATATTTCAGTTGGAGATACTCATGTGAGCAAGTCAAAACGAATCAACAGGAAGCTTCCTACTGCAAGTTTTGACTCGGTCCCAGTGCAAGCAAATCCTGAATTTGAAAAACCAAAACGAAACACAAGGAAAATTTCAAACCAATCCTCAGATCCTCATGTGCAGGAAAACCCACAAAGTGAGCTTGAAAAGATTAAACGTAACTTGAGAAAGGTTTATAACCCAGTTGTTGAGAATGCTGTTCCGTCAGAAGTTGAATCCGAAATGCCAAAGGATCATTTGGAAAAGGTAACAGTTACCTCATGCCTTGCTGTTTCAGAGCAAGAGGTCATTAGTTCTAATGAGAAGATCAAGAAGGAAGCAATATTAACTGTTTCCAGTGTGCCAGATATAGAAACTACTCCAAGACTTTCAGTTAGTAAGGAGGTGTCTGACACACCAAGCAGTTATCAAGTGACTGTGGAATCAAAACCATTGACTGAGATTACAACTAAAGATAAAAACATTTCTGTTTCTGACGAAGTAAAAAATGAGCCCATAGATTTACCAGAGCCTATTTGTAAAGATGAAAATTCTCACTTAACAAATGGAGATTTGAGTCACAAGGAAGATCAAATAGGCAGTGAAAACCAGAAACCAAACCAAAAAGCCTCAATTGTAGCAAAGCAGGAACGTGCAGAGAATGGTATACAGAATAGTCCAACATTACCGAGTTACATGGCAGCAACTGAATCTGCAAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAGGATGGAAGTGAAAGAAACAACCATACTCGGCGACATTCTCTGCCATCCTCAACTAACAGCAAAATTAATTCACCTTCACCTAGGACACAGAGACCAGTTCAATCAGGTGGCAAAGGTGGCCACAGAAGTGACAGAACTGTATCATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAGTGGAGGCGTTCTCACCAACCTAGGATGACAAAATCTTTGAAAGGTTCTAGTAGTGTACGCTTTCGTGTTAAACGCTTGCTGTTAGAAATAGGCATGGTGGATTTGAGTGTGGAATCAAATTACTCTAATGTTACGTCGAGGATTGGTGGCCATTGGAGTGCATTCATTACATCCAATTAA 2010 0.4134 MQREQSNKQSNYKIYAALDQCLSLSLYLSLPWNGRFEVKTFHIGQVPISRWGSREKLVNQKGVVVTSKVPETGLALEPTSDTIARHEEDPELENKEAENVLPGNQEIDTVGSINEDAALDPEKMRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCSMYGIVKFQALVRGGIVRQSNVGSEIHEKSNILNPLDGKLVKPNAMFTKITKLSANAFIRKLLTSSTTIMALRLQYVPGDPNSVLSWLERWSASHFWKPVPQPKKIRDTKSQRKHGNISVGDTHVSKSKRINRKLPTASFDSVPVQANPEFEKPKRNTRKISNQSSDPHVQENPQSELEKIKRNLRKVYNPVVENAVPSEVESEMPKDHLEKVTVTSCLAVSEQEVISSNEKIKKEAILTVSSVPDIETTPRLSVSKEVSDTPSSYQVTVESKPLTEITTKDKNISVSDEVKNEPIDLPEPICKDENSHLTNGDLSHKEDQIGSENQKPNQKASIVAKQERAENGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNNHTRRHSLPSSTNSKINSPSPRTQRPVQSGGKGGHRSDRTVSSSRDGNGKVIQAEWRRSHQPRMTKSLKGSSSVRFRVKRLLLEIGMVDLSVESNYSNVTSRIGGHWSAFITSN 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00278 669 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Gma05g00278 669 PANTHER IQ-DOMAIN 5-RELATED 54 601 - -
Gma05g00278 669 SMART iq_5 148 169 IPR000048 GO:0005515
Gma05g00278 669 SMART iq_5 125 147 IPR000048 GO:0005515
Gma05g00278 669 MobiDBLite consensus disorder prediction 275 290 - -
Gma05g00278 669 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
Gma05g00278 669 Pfam IQ calmodulin-binding motif 128 147 IPR000048 GO:0005515
Gma05g00278 669 MobiDBLite consensus disorder prediction 275 349 - -
Gma05g00278 669 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Gma05g00278 669 Gene3D - 124 172 - -
Gma05g00278 669 PANTHER PROTEIN IQ-DOMAIN 31 54 601 - -
Gma05g00278 669 MobiDBLite consensus disorder prediction 483 498 - -
Gma05g00278 669 MobiDBLite consensus disorder prediction 533 623 - -
Gma05g00278 669 Pfam Protein of unknown function (DUF4005) 512 592 IPR025064 -
Gma05g00278 669 MobiDBLite consensus disorder prediction 561 582 - -
Gma05g00278 669 MobiDBLite consensus disorder prediction 459 477 - -
Gma05g00278 669 MobiDBLite consensus disorder prediction 459 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00278 Gma-Chr5 2504957 2512810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00278 54 613 IQD Protein Family AT1G74690 42.017 1.49e-117 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00278 - - gmx:100794636 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00278 05 2504957 2512810 Gma17g00925 17 7894922 7902093 ECH
Gma02g00190 02 1835633 1840918 Gma05g00278 05 2504957 2512810 ECH
Gma01g00396 01 4848928 4853865 Gma05g00278 05 2504957 2512810 ECH
Gma08g02796 08 43947319 43952431 Gma05g00278 05 2504957 2512810 ECH
Gma18g01115 18 16136569 16141916 Gma05g00278 05 2504957 2512810 ECH
Gma05g00278 05 2504957 2512810 Gma05g00278 05 2504957 2512810 ECH
Gma17g00925 17 7894922 7902093 Gma05g00278 05 2504957 2512810 GST
Gma01g00396 01 4848928 4853865 Gma05g00278 05 2504957 2512810 PCT