Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00275 ATGGGAAATTGCTGTGGAACTCGTTGCAAGGTTGATGACACTTTGAACTCCAACCACAGTTCTGCAGATGTTACCAAAGTTCACCGTAGAAGCACCCATTTGTTAGTTCATTCAAATCTAAACGGGCATGGATACAGTGATGAAGGCAAACCTGAGATTATTCTCCCCACTCCAAGATCTGAAGGGGACATACTTTCTTCCCCGCATTTAAAACCCttcacattgcatgatcttaagaaggccactagaaatttccagcttgatagtcttattggagaagggggatttggttatgtgtataAGGGGTTGATTAATGATGGTAAATCCTTTGGGCCTACAATGCCTAAATCTGGAACTGTTGTAGCTGTGAAGAAGCTTAAGCCTGAAGGTTTTCAAGGGCATAAGGAGTGGCTGGCAATCAACTATCTTGGACAACTTCGCCATCCAAATCTTGTCAAACTTATTGGATACTGTCTAGAAGGAGATAACCGACTTCTAGTATATGAGTACATGCCCAACAGAAGCTTGGAAGATCATATATTTCGAAAAGGCACACAACCACTTCCTTGGGCAACAAGAGTCAAGATTGCTATTGGTGCTGCTCAAGGTCTTTCCTTCCTACATGACTCTAAGCAACAAATTATCTACCGTGATTTCAAGGCTTCTAATATATTGTTAGATTCGgaatttaatgcaaaactctcagactttggattggccaaagcaggccccactggtgatcgttcttatgtttccactcaagtcctgggaactcatggctatgctgctcctgaatatATTGCTACAGgtcggttgacttcaaggtgtgatgtctatagctttggggttgtgctattggaactactatcagggcgccatgctattgataacacaaaatctggagtggaacataatttggtAGAGTGGTCAAGACCCTATTTGGGTGATAGGAGGAAGTTGTTCCGGATCATGGACACCAAGTTAGAAGGGCAATACCCACAGAAGGCAGCTTATACAATTGCAATTATTGCCTTACAATGTATTAGTGAGGCCAAGACTAGACCGCAGATGTTTGAGGTTTTGGCTGCCTTGGAACACCTGCGAGCCATTAGACATTCAGCTAGCCCATCTGGAGAAGAGAAGTCCATGCCAAGCCCTATGTTAAAATCCCCTTTGGGACATAACCATCCAGAGTTGTGA 1200 0.3217 MGNCCGTRCKVDDTLNSNHSSADVTKVHRRSTHLLVHSNLNGHGYSDEGKPEIILPTPRSEGDILSSPHLKPFTLHDLKKATRNFQLDSLIGEGGFGYVYKGLINDGKSFGPTMPKSGTVVAVKKLKPEGFQGHKEWLAINYLGQLRHPNLVKLIGYCLEGDNRLLVYEYMPNRSLEDHIFRKGTQPLPWATRVKIAIGAAQGLSFLHDSKQQIIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRSYVSTQVLGTHGYAAPEYIATGRLTSRCDVYSFGVVLLELLSGRHAIDNTKSGVEHNLVEWSRPYLGDRRKLFRIMDTKLEGQYPQKAAYTIAIIALQCISEAKTRPQMFEVLAALEHLRAIRHSASPSGEEKSMPSPMLKSPLGHNHPEL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00275 399 Gene3D Transferase(Phosphotransferase) domain 1 171 383 - -
Gma05g00275 399 Gene3D Phosphorylase Kinase; domain 1 57 170 - -
Gma05g00275 399 MobiDBLite consensus disorder prediction 374 399 - -
Gma05g00275 399 ProSitePatterns Protein kinases ATP-binding region signature. 91 124 IPR017441 GO:0005524
Gma05g00275 399 PANTHER BNAC02G17010D PROTEIN 26 387 - -
Gma05g00275 399 PANTHER OS01G0588500 PROTEIN-RELATED 26 387 - -
Gma05g00275 399 SUPERFAMILY Protein kinase-like (PK-like) 63 365 IPR011009 -
Gma05g00275 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Gma05g00275 399 CDD STKc_IRAK 91 367 - -
Gma05g00275 399 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
Gma05g00275 399 ProSiteProfiles Protein kinase domain profile. 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00275 Gma-Chr5 2482937 2487228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00275 73 367 Glycoside Hydrolase AT3G07070 51.333 2.22e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma05g00275 PK_Tyr_Ser-Thr 8.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00275 - - gmx:100791844 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00275 05 2482937 2487228 Gma05g00275 05 2482937 2487228 ECH
Gma01g00402 01 4920941 4925833 Gma05g00275 05 2482937 2487228 PCT