Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00267 ATGGAGGAAGACGACGATCTCCACCACCATCACCACCGTCAGAACAACTTCCCATTCCAGCTACTTGAGAAGAAAGAAGACCAAGAAACCGCCTCATGCTCCACCTCCTCCCTTTATCCTTCCCTAGCAATCTCCGCGGAACCGAGCACGTCCAATTCCACCCGATCCAACCAGCTCGCCGTGGCGGCTGCGGCGGAGGCTCCTAACAGCAAAAAGCCTCCGCCGAAGCGCACCTCGACCAAGGACCGGCACACGAAGGTGGACGGGCGCGGGCGGCGCATCCGAATGCCGGCCCTCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAACTGGGCCACAAGTCGGACGGCGAAACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCTGCTGTGATCGCCGCCACCGGCACCGGCACCATCCCCGCCAACTTCACCTCCCTGAACATCTCCCTACGCAGTTCCGGCTCCTCCATGTCCGTCCCCTCCCAGCTCCGATCCTCCTACTTCAACCCCAATTTCTCCCTCCAACAACATCAACGTAGAACCTTCTTCCCCGGCATAGCCTTTTCCTCCGACAATACCAACAACAACACATCAACACTTCTCAATTTCCAATCCAACACCCTCAACACCACCATGCTGCAGCAGCAGGCCAAGCCGGAGCTTAGCGACGGCGGCGTGCCATCTTCCTTAGACATTTCAGACACAAACACAGAAGACacaacaacaacaacaacaacaacaacaaACCTAAGCCGCAAGAGAAGACCAGCAACTACAGAACAAGACCTATCCTCCAGCACGCAGCAGCACCAAATGGGTAGCTATCTCCTACAATCAAGTGCAGGCGCTATTCCAGCGAGCCACGCCGCCAACATATGGATGGTGGCCAATTCAAACTCGAATCAGGTCATGAGTGGCGATCCCATATGGACCTTCCCACCGGTTAACAACAGTGCTTTGTATCGAGGCACCATGTCTAGCGGCTTGCATTTCATGAATTTTCCTACGCCCGTGGCGTTGTTGCCGAGTCAGCAACTAGGGTCTTCTGGGAATATTGGTGCTGTTGGTGGAAGCAGTCATAATAATCACAATAATAATATCAATGAAGGGCATTTGAGTATGCTTGCGGGGCTTAGTCCTTATCGACCTGTTATTGGCGTTTCGGAATCTCAGGCGAGTGGCTCGCAATCGCATCGTGGAAGTGGCACCGATGATCGACATGATAATAGCTCCAGTCACCACTCCTAG 1251 0.5428 MEEDDDLHHHHHRQNNFPFQLLEKKEDQETASCSTSSLYPSLAISAEPSTSNSTRSNQLAVAAAAEAPNSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQHQRRTFFPGIAFSSDNTNNNTSTLLNFQSNTLNTTMLQQQAKPELSDGGVPSSLDISDTNTEDTTTTTTTTTNLSRKRRPATTEQDLSSSTQQHQMGSYLLQSSAGAIPASHAANIWMVANSNSNQVMSGDPIWTFPPVNNSALYRGTMSSGLHFMNFPTPVALLPSQQLGSSGNIGAVGGSSHNNHNNNINEGHLSMLAGLSPYRPVIGVSESQASGSQSHRGSGTDDRHDNSSSHHS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00267 416 MobiDBLite consensus disorder prediction 1 30 - -
Gma05g00267 416 MobiDBLite consensus disorder prediction 216 272 - -
Gma05g00267 416 MobiDBLite consensus disorder prediction 31 60 - -
Gma05g00267 416 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 415 IPR005333 GO:0003700
Gma05g00267 416 Pfam TCP family transcription factor 78 216 IPR017887 -
Gma05g00267 416 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 9 415 - -
Gma05g00267 416 MobiDBLite consensus disorder prediction 401 416 - -
Gma05g00267 416 MobiDBLite consensus disorder prediction 1 91 - -
Gma05g00267 416 ProSiteProfiles TCP domain profile. 80 134 IPR017887 -
Gma05g00267 416 MobiDBLite consensus disorder prediction 389 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00267 Gma-Chr5 2431464 2433175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00267 70 409 TCP Transcription Factor Family AT3G47620 44.743 3.19e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma05g00267 TCP 3.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00267 - - gmx:100790785 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00267 05 2431464 2433175 Gma17g00934 17 7975100 7976561 ECH
Gma05g00267 05 2431464 2433175 Gma05g00267 05 2431464 2433175 ECH
Gma17g00934 17 7975100 7976561 Gma05g00267 05 2431464 2433175 GST
Gma01g00418 01 5321213 5322475 Gma05g00267 05 2431464 2433175 PCT
Gma02g00969 02 10320039 10322002 Gma05g00267 05 2431464 2433175 PCT