Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00258 atggagtctcagccacttatgggttggagctctttctacgaaatagatgaagaaccatttccatttacgtgccaattttcttacagCGGAAACAGTGAAGTGTATCCCTCACTGGATTGGCCCTACGATTTTCCCATACAAGACTACTATATTGATGCTGTTCCTCTTATGGATTATTACCCTTCAGATCCTTTATATGAAACACTCACTACTGAACCAACACAAAGCGTGCAAGATTATGATTTTTATGACATTAAAAAGGGGCTACCTTTCTGGAAGGAAGTGGATGCTGTGTTTGATTCACAAAAAGTATTTTTATTTGGCAACAACGAAGAAAGTGGGACCAAGAAGGAAATGATGGAGGATGGAAAAGTTAACGACAACCGAGGGATAGAAGAGAGAATCAGCGGTAGCAGTAGCAGTTGCAGAATGTTGTCAAGGAAGACCATATCTCAGTACTTCTACATGCCCATAACACAAGCAGCCAGAGAACTTAATGTGGGCATAACCCTTTTGAAGAAAAGGTGCAGAGAGGTGGGTATTAGAAGGTGGCCCCACAGGAAGCTGATGAGCTTGCAAACTCTGATAAACAATGTACAGGAGCTAGGAAAAGAGGAGGGGAGAGAGAGTGAAGAGAAGTTAAGAAGTGCGATAGAGATATTAGAGAGGGAAAAGAAGGTTTTGGAGGAAATGCCGGATACTGAACTTGAAGACACTACAAAGAGGCTTAGACAAGCGTGTTTCAAGGCCAACTACAAGAAGAGGAAGCTCACAGTCACAGGGCGGGGGAGGGAACCACACTCTTCTTCTTTCAGTGGCTTTGTTGCTAGAAGTATTGTTAACGCAACGGGAGAATATAGTAATGAAAGTGAAGAAGAACGAGACATCAAGTATCTGTTGTCTCAGTTTCTGGAGTAG 918 0.3878 MESQPLMGWSSFYEIDEEPFPFTCQFSYSGNSEVYPSLDWPYDFPIQDYYIDAVPLMDYYPSDPLYETLTTEPTQSVQDYDFYDIKKGLPFWKEVDAVFDSQKVFLFGNNEESGTKKEMMEDGKVNDNRGIEERISGSSSSCRMLSRKTISQYFYMPITQAARELNVGITLLKKRCREVGIRRWPHRKLMSLQTLINNVQELGKEEGRESEEKLRSAIEILEREKKVLEEMPDTELEDTTKRLRQACFKANYKKRKLTVTGRGREPHSSSFSGFVARSIVNATGEYSNESEEERDIKYLLSQFLE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00258 305 Pfam RWP-RK domain 145 192 IPR003035 -
Gma05g00258 305 ProSiteProfiles RWP-RK domain profile. 127 212 IPR003035 -
Gma05g00258 305 PANTHER PROTEIN RKD1-RELATED 38 266 - -
Gma05g00258 305 PANTHER PROTEIN RKD4 38 266 IPR044607 GO:0003700
Gma05g00258 305 Coils Coil 204 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00258 Gma-Chr5 2333014 2334273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00258 129 256 AtRKD Transcription Factor Family AT1G18790 66.406 4.64e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma05g00258 RWP-RK 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00258 - - gmx:100788666 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00258 05 2333014 2334273 Gma05g00258 05 2333014 2334273 ECH
Gma17g00945 17 8076028 8077183 Gma05g00258 05 2333014 2334273 GST
Gma05g00258 05 2333014 2334273 Gma04g01638 04 44610226 44611555 PCT