Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00232 ATGTCAGAGCAGGAAACACATTCTTGTGGCTTACTCTTATTCTTTTTCTGGATCCTTCTTTCAGGTAAAGCTGTTGTAGGGGAATCTTTGGACAAAGACAAAGAGGTTCTGCTGAAGCTGAAATTGTACCTGGACAGCAAAATTCTTGCAGACAGAGGAGGGTACATATATTGGAACACCAATAGCTCCAATCCTTGTGAATGGAAAGGAATTTCATGCAGTGCTACGAAGAGGGTGGTTGGCATAGACCTTTCTAATAGTGACATCACTGGTGAGATATTTAAGAATTTCTCGCAGCTCACTGAACTCACACATCTTGATCTCTCTCAGAACACGCTCTCTGATGAGATTCCTGAGGACTTGAGGCACTGCCACAAGCTCGTGCATCTCAACCTATCACATAATATTCTTGAAGGGGAGCTGAACTTGACTGGATTGATAAGCTTGTGCACATTGGACTTGTCAAATAACAGATTTTATGGGGATATTGGGTTGAATTTTCCTGCCATTTGTGCCAATTTAGTCATTGCGAATGTCTCAGGTAATAAATTGACTGGTAGGATTGAAAGCTGCTTTGATCAATGTGTAAAGTTGCAGTACTTGGATTTGAGCACCAACAATCTGAGTGGAAGCATATGGATGAAGTTTGCGAGGCTCAATGAGTTTTATGTTGCCGAGAACCATCTAAATGGGACTATTCCTTTGGAAGCTTTTCCTTTGAATTGTAGCCTTCAAGAACTAGACCTTTCACAAAATGGATTTGTTGGTGAGGCACCTAAGGGGGTTGCTAACTGCAAGAATTTAACCAGTCTGAATCTTTCTAGTAACAATCTTACTGGGACTATTCCCATTGAAATAGGGTCCATTTCAGGCCTTAAAGCATTGTACCTGGGAAACAACAGCTTTTCAAGAGATATTCCTGAGGCCCTTCTGAACTTGACCAATTTGTCCTTCTTGGATTTGAGCAGAAACCAATTTGGTGGGGACATACCAAAGATATTTGGCAAATTTAAGCAAGTAAGCTTTCTTCTGTTGCACTCAAATAATTACAGTGGAGGATTGATATCCTCAGGAATTCTCACATTACCAAACATTTGGCGGTTAGACCTAAGCTACAATAACTTTTCAGGTCCACTACCTGTTGAGATTTCTCAAATGACAAGTCTGAAGTTTCTAATGTTATCCTACAACCAATTCAGTGGATCCATTCCACCTGAATTCGGAAACATTACCCAACTTCAAGCCCTTGACCTTGCCTTCAACAATTTGAGTGGGCCTATACCCTCAAGCCTTGGAAACTTGAGCTCCCTCTTATGGTTGATGCTTGCAGACAATTCTTTAACCGGAGAAATCCCTCTGGAGTTGGGAAACTGTTCAAGCTTGTTATGGCTAAACCTTGCCAACAATAAGCTCTCTGGAAGTTTGCCTTCTGAACTGTCCAAAATTGGAAGGAATGCCACGACCACATTTGAATCGAATAGGCGAAACTATCAAATGGCTGCTGGATCTGGTGAATGCTTAGCAATGAGGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATAGCCTCTTAACCAGGAAAACTTGTAGAGAGCTTTGGGACAAATTGCTCAAAGGATATGGTGTTTTCCAGATTTGCACGCCTGGTGAAAGAATTCGCAGAACTCAGATATCCGGGTATATTCAGCTAAGTTCAAACCAGCTCAGTGGTGAAATCCCTTCAGAGATTGGGACAATGGTGAACTTCAGCATGATGCACTTGGGGTTCAACAACTTCTCTGGGAAGTTCCCTCCAGAGATTGCAAGTATTCCCATTGTGGTGCTAAACATCACAAGTAACCAGTTTTCAGGTGAAATTCCCGAAGAAATTGGCAGCTTGAAGTGCTTGATGAATCTTGACTTGTCATACAACAATTTCTCTGGGACCTTTCCCACAAGTTTGAACAACTTGACAGAGCTTAACAAGTTCAACATCTCATACAACCCCCTAATATCCGGTGTGGTTCCATCAACACGACAGTTTGCTACCTTTGAGCAAAATTCATATTTAGGCAACCCCCTTTTGATCCTTCCCGAGTTTATCGATAACGTTACCAATCATACAAACACCACCTCTCCCAAAGAGCATAAAAAGTCCACAAGACTGTCTGTGTTTTTGGTGTGTATAGTTATAACACTGGTTTTTGCAGTATTCGGGCTTCTTACGATCCTAGTCTGTGTATCGGTGAAAAGCCCTTCAGAGGAACCAAGATACCTCTTGAGGGATACAAAACAATGGCATGATTCCAGCAGCTCCGGATCCTCATCATGGATGTCTGACACAGTTAAGGTTATCCGTCTGAACAAGACAGTTTTCACACATGCCGACATTCTGAAAGCAACTAGCAGCTTCTCAGAGGACAGAGTTATAGGAAAAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGATGGCAGACAAGTGGCAGTGAAGAAGCTTCAAAGGGAAGGTCTTGAGGGTGAGAAGGAATTCAAGGCTGAAATGGAGGTTCTGAGTGGTCATGGCTTTGGTTGGCCACATCCAAACCTGGTCACACTCTACGGTTGGTGCCTAAATGGTTCAGAGAAGATACTGATTTATGAGTACATAGAAGGTGGAAGCTTGGAGGATTTAGTCACTGATAGAACACGTTTCACATGGAGGAGGAGGCTAGAAGTGGCAATTGATGTGGCACGTGCACTAATCTATTTGCACCACGAGTGCTACCCTTCTGTTGTTCACAGAGATGTGAAGGCTAGCAATGTGTTACTAGACAAAGATGGGAAGGCCAAGGTTACCGATTTTGGGCTTGCTAGAGTGGTTGATGTTGGGGAGAGTCATGTGAGTACTATGGTGGCTGGGACTGTGGGCTATGTTGCACCTGAATATGGACACACTTGGCAGGCTACTACAAAAGGGGATGTGTACAGTTTTGGGGTGTTGGTTATGGAGCTGGCAACAGCAAGAAGAGCAGTGGATGGAGGGGAAGAGTGTTTGGTGGAGTGGGCTAGGCGTGTTATGGGTTATGGACGACATCGCGGGTTGGGTCGTTCTGTGCCGCTTTTGCTAATGGGTTCTGGGCTTGTTGGTGGGGCTGAGGAGATGGGTGAGTTGCTAAGGATTGGGGTGATGTGCACAACTGATGCACCACAGGCTAGGCCTAACATGAAGGAGGTTCTTGCTATGCTGATTAAGATATCCAACCCCAAGGGGGACTCAAGTTATGGACCCTACCTTATTTAG 3273 0.4387 MSEQETHSCGLLLFFFWILLSGKAVVGESLDKDKEVLLKLKLYLDSKILADRGGYIYWNTNSSNPCEWKGISCSATKRVVGIDLSNSDITGEIFKNFSQLTELTHLDLSQNTLSDEIPEDLRHCHKLVHLNLSHNILEGELNLTGLISLCTLDLSNNRFYGDIGLNFPAICANLVIANVSGNKLTGRIESCFDQCVKLQYLDLSTNNLSGSIWMKFARLNEFYVAENHLNGTIPLEAFPLNCSLQELDLSQNGFVGEAPKGVANCKNLTSLNLSSNNLTGTIPIEIGSISGLKALYLGNNSFSRDIPEALLNLTNLSFLDLSRNQFGGDIPKIFGKFKQVSFLLLHSNNYSGGLISSGILTLPNIWRLDLSYNNFSGPLPVEISQMTSLKFLMLSYNQFSGSIPPEFGNITQLQALDLAFNNLSGPIPSSLGNLSSLLWLMLADNSLTGEIPLELGNCSSLLWLNLANNKLSGSLPSELSKIGRNATTTFESNRRNYQMAAGSGECLAMRRWIPADYPPFSFVYSLLTRKTCRELWDKLLKGYGVFQICTPGERIRRTQISGYIQLSSNQLSGEIPSEIGTMVNFSMMHLGFNNFSGKFPPEIASIPIVVLNITSNQFSGEIPEEIGSLKCLMNLDLSYNNFSGTFPTSLNNLTELNKFNISYNPLISGVVPSTRQFATFEQNSYLGNPLLILPEFIDNVTNHTNTTSPKEHKKSTRLSVFLVCIVITLVFAVFGLLTILVCVSVKSPSEEPRYLLRDTKQWHDSSSSGSSSWMSDTVKVIRLNKTVFTHADILKATSSFSEDRVIGKGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGHGFGWPHPNLVTLYGWCLNGSEKILIYEYIEGGSLEDLVTDRTRFTWRRRLEVAIDVARALIYLHHECYPSVVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGESHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLVMELATARRAVDGGEECLVEWARRVMGYGRHRGLGRSVPLLLMGSGLVGGAEEMGELLRIGVMCTTDAPQARPNMKEVLAMLIKISNPKGDSSYGPYLI 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00232 1090 PRINTS Leucine-rich repeat signature 198 211 - -
Gma05g00232 1090 PRINTS Leucine-rich repeat signature 313 326 - -
Gma05g00232 1090 SUPERFAMILY L domain-like 76 285 - -
Gma05g00232 1090 Gene3D Ribonuclease Inhibitor 318 509 IPR032675 -
Gma05g00232 1090 Gene3D Phosphorylase Kinase; domain 1 763 879 - -
Gma05g00232 1090 ProSiteProfiles Protein kinase domain profile. 800 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00232 1090 Gene3D Transferase(Phosphotransferase) domain 1 880 1084 - -
Gma05g00232 1090 SUPERFAMILY Protein kinase-like (PK-like) 781 1075 IPR011009 -
Gma05g00232 1090 SMART serkin_6 800 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00232 1090 Pfam Protein kinase domain 801 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00232 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Gma05g00232 1090 ProSitePatterns Protein kinases ATP-binding region signature. 806 829 IPR017441 GO:0005524
Gma05g00232 1090 SUPERFAMILY L domain-like 563 692 - -
Gma05g00232 1090 Gene3D Ribonuclease Inhibitor 30 311 IPR032675 -
Gma05g00232 1090 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1080 - -
Gma05g00232 1090 SMART LRR_typ_2 386 409 IPR003591 -
Gma05g00232 1090 SMART LRR_typ_2 434 458 IPR003591 -
Gma05g00232 1090 SMART LRR_typ_2 313 336 IPR003591 -
Gma05g00232 1090 SMART LRR_typ_2 100 124 IPR003591 -
Gma05g00232 1090 CDD STKc_IRAK 806 1076 - -
Gma05g00232 1090 Pfam Leucine rich repeat 267 326 IPR001611 GO:0005515
Gma05g00232 1090 Pfam Leucine rich repeat 82 135 IPR001611 GO:0005515
Gma05g00232 1090 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1080 - -
Gma05g00232 1090 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Gma05g00232 1090 SUPERFAMILY L domain-like 240 668 - -
Gma05g00232 1090 Gene3D Ribonuclease Inhibitor 554 708 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00232 Gma-Chr5 2127415 2130839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00232 66 1073 Receptor kinase-like Gene Family AT1G55610 33.155 3.21e-156 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Gma05g00232 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00232 - - gmx:100783886 2127.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00232 05 2127415 2130839 Gma05g00232 05 2127415 2130839 ECH
Gma17g00972 17 8290043 8292091 Gma05g00232 05 2127415 2130839 GST