Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00194 ATGGCCACCGTCAAGAAGGGAAAGCCTGATCTCCGTAAGGTGTTGCCTGTTGTCATCGTCCTTCAGCACAGGCCATGGCACAGAAAGGATGGCGTTTTACATGCATTTCGAAGATTATGTTGGGTCACAGTGAATCCCAAGGGTGAAATGAAAGGATCTACTATCACTGGTCCAATTGGGAAGGAGTGTGCTAATCTCTGGCCGAGGATTGCAAGAGTTGCCAATGCTATTGTTTAG 237 0.4768 MATVKKGKPDLRKVLPVVIVLQHRPWHRKDGVLHAFRRLCWVTVNPKGEMKGSTITGPIGKECANLWPRIARVANAIV 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00194 78 Pfam Ribosomal protein L14p/L23e 2 78 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gma05g00194 78 SMART Ribosomal_L14_2 1 78 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gma05g00194 78 SUPERFAMILY Ribosomal protein L14 1 78 IPR036853 GO:0003735|GO:0005840|GO:0006412
Gma05g00194 78 PANTHER 60S RIBOSOMAL PROTEIN L23 1 78 - -
Gma05g00194 78 Gene3D Ribosomal protein L14 1 78 IPR036853 GO:0003735|GO:0005840|GO:0006412
Gma05g00194 78 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 78 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00194 Gma-Chr5 1833702 1833938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00194 1 78 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 75.949 1.72e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00194 K02894 - qsu:112032434 120.553