Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00192 ATGATTGAAAGTTCAGGTAAAGTTCATGAAGCCAAAAATCAACAAGAGGGTGATGATGATAACAACATTAAAATTGAGAAGCTCTTGAAGGCACGACCCTCCACCTCCTCATCATCAAGATCATGGTCAGCATTCAGAAATCCAAGAATTGTGAGAGTCTCACGTTCCTTGGGAAGCAAAGATAGGCACAGCAAGGTTTGCACCATTAGGGGACTGAGGGACAGAAGGATTAGACTTTCTGTTCCCACAGCAATTCAGTTATACAATCTTCAAGACAAGCTTGGATTCAACCAACCTAGCAAGGTGGTAGATTGGTTGCTTGAAGCCACCAAATCTGATATTGACAAACTCCCACCACTTCAATTTCCTCACTGTTTTGCTCATCAGTTTCACCAGCAAACCCTACTGCCAGGTACCTCTCAGTTTTCTCTTGGAGGCTTCTATGATGCTGCTAATAACAACTCCACTTTTATTAAGGATGGGGGAAATCAAAACCGCCTCACGGCAACAAAGTCAACAAGGTATTGGGATATAGATTCACTAAATAATGGTAAGGAGTTAGCTGAAAGTGTGTCAATCTCCCAAAAAGGACAGTTCTGGATCAAAACAAATGAACAAGAAAACCATCAAGGTGGAGGAATTGGTGGTAGTAGTACTACTACTCATAATAGAGAGGATAATTCTTCAGTTCATTATAAGCTCTTCCCAATTGGGACAACTACTAATAACTCTTATTTACCTGGTTTGTTAAACAATGGCATGACACATAACTCCTACCACCATTCTGAGCCTTCAAGGCTATCTTTGTCCCACTTTGGAAGCCATGGATTGTTTCCTTCACATGATTCCCATCAAAGCAGTGGCATTGGTGTGCCATTTTCGTCTTCTAATTTCTCTGGAGCATCATCTGGTCCCCAATTGCTTTTTTGTCCAACTTCTGCTACACCATCTGCTTTTTACTCGGTGGAAAGTGATCCAAGACAATCCAACAACAATGTTCAGATCTTTAGCTCAAGTTCCCAAGTCATGAAGCGTCTTCCTCTCATCCAATCTCTTCATTCAACCAATTCACCTATTAGTCGGCGCCTTCCGACATCATTTAGCTCCAAGCTTCTTGATTCAGATAACAATGATCGTAGCCAACCAAATAAGGGTACTAGTTCTCGTTCTTGA 1173 0.4152 MIESSGKVHEAKNQQEGDDDNNIKIEKLLKARPSTSSSSRSWSAFRNPRIVRVSRSLGSKDRHSKVCTIRGLRDRRIRLSVPTAIQLYNLQDKLGFNQPSKVVDWLLEATKSDIDKLPPLQFPHCFAHQFHQQTLLPGTSQFSLGGFYDAANNNSTFIKDGGNQNRLTATKSTRYWDIDSLNNGKELAESVSISQKGQFWIKTNEQENHQGGGIGGSSTTTHNREDNSSVHYKLFPIGTTTNNSYLPGLLNNGMTHNSYHHSEPSRLSLSHFGSHGLFPSHDSHQSSGIGVPFSSSNFSGASSGPQLLFCPTSATPSAFYSVESDPRQSNNNVQIFSSSSQVMKRLPLIQSLHSTNSPISRRLPTSFSSKLLDSDNNDRSQPNKGTSSRS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00192 390 MobiDBLite consensus disorder prediction 1 24 - -
Gma05g00192 390 Pfam TCP family transcription factor 59 151 IPR017887 -
Gma05g00192 390 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 384 IPR005333 GO:0003700
Gma05g00192 390 MobiDBLite consensus disorder prediction 357 390 - -
Gma05g00192 390 ProSiteProfiles TCP domain profile. 59 117 IPR017887 -
Gma05g00192 390 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 1 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00192 Gma-Chr5 1815307 1816479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00192 10 211 TCP Transcription Factor Family AT5G60970 48.598 1.25e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma05g00192 TCP 8.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00192 - - gmx:102665855 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00752 17 6322213 6323751 Gma05g00192 05 1815307 1816479 GST
Gma05g00192 05 1815307 1816479 Gma04g01558 04 42197830 42199065 PCT
Gma04g01558 04 42197830 42199065 Gma05g00192 05 1815307 1816479 PCT