Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00164 ATGGAATGCAATGAAGATGATGAACTCCATGTAGCACCTTATGCTTCCTTAACACAGCGCCTTCACTATCATTCTCCAACCCAGAAACCTATCTTTACCTCAACAAACCTCTTGAACGTGGAAGCTGGTGAAGGCCATAATTTGAACCACATGGATCCACCTCATTGTTTGCATCATACTCCATTTTACTGCTCCCAATTTCAGCTTCCTAGCAACAGCAACAACCCAATTCAAATCCCACTCCATAAACCCTCTCCCAACATATCATCAAACAACAACAACAACAACAATTCTGACGAAGCAAAGGCTCTCCTTGATGACAGAAAGAAGAAGAGGATGTTCTCCAACAGAGAATCCGCTCGAAGGTCGCGGATGCGAAAGAAGCAACAAATTGAAGTCCTGCAGTACCATGTGGACAATCTGCAGACATTAAACCATCAACTGTCCCAAAAGATCATTTACTTGTTGGAATGTAACCAACAAATCCACCAACAGAATGCTCAGCTAAAAGAGAAAGTTTTCTCTCTTCAGGTAGCACTCTCTGACTTGTTGGCTACTTCTGGAAGTGCTGAGCAACCTCACCTCATCCCTAATGGCTTCCTAGCCGAGTCTTCGACTCGACCAATTGCGAGTTCCAGAACATAG 645 0.4388 MECNEDDELHVAPYASLTQRLHYHSPTQKPIFTSTNLLNVEAGEGHNLNHMDPPHCLHHTPFYCSQFQLPSNSNNPIQIPLHKPSPNISSNNNNNNNSDEAKALLDDRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDNLQTLNHQLSQKIIYLLECNQQIHQQNAQLKEKVFSLQVALSDLLATSGSAEQPHLIPNGFLAESSTRPIASSRT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00164 214 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 106 169 IPR004827 GO:0003700|GO:0006355
Gma05g00164 214 MobiDBLite consensus disorder prediction 101 126 - -
Gma05g00164 214 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 1 207 - -
Gma05g00164 214 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 207 IPR044521 -
Gma05g00164 214 MobiDBLite consensus disorder prediction 75 100 - -
Gma05g00164 214 MobiDBLite consensus disorder prediction 75 126 - -
Gma05g00164 214 Gene3D - 107 181 - -
Gma05g00164 214 SUPERFAMILY Leucine zipper domain 108 164 IPR046347 GO:0003700|GO:0006355
Gma05g00164 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 111 126 IPR004827 GO:0003700|GO:0006355
Gma05g00164 214 Pfam bZIP transcription factor 108 166 IPR004827 GO:0003700|GO:0006355
Gma05g00164 214 SMART brlzneu 104 168 IPR004827 GO:0003700|GO:0006355
Gma05g00164 214 CDD bZIP_plant_GBF1 109 157 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00164 Gma-Chr5 1561803 1562447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00164 106 191 bZIP Transcription Factor Family AT5G60830 58.140 1.42e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma05g00164 bZIP_1 1.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00164 - - gmx:102664001 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00779 17 6565304 6565675 Gma05g00164 05 1561803 1562447 GST