Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00157 ATGGCACAAGATACTGTTTCTGGAGTTGACTCGCCTCGGGGACGTCTATTACGAGATCAGGTTCAAGTGGTTAAAAAAAAGGATTCTGATCGCTATGAAATTGTTCCTATCCAAGATTCTTTGTCATTTGAGAAAGGATTCTTCATATTTATCCGTGCATGCCAGTTGTTGGCTCAAAAGAATGATGGAATCATATTAGTAGGAGTTGCAGGTCCATCTGGAGCAGGGAAAACTGTTTTCACCGAGAAGGTCCTCAATTTTATGCCAAGCATAGCTGTCATAACAATGGACAATTATAATGATTCTAGTAGAATTATTGATGGAAACTTCGATGACCCTCGGTTGACAGATTATGATACCCTGCTCGAAAATATACAGGGTCTTAAAGCAGGGAAGCCTGTTCAAGTTCCAATATACGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGTTgactgttgaagtccctggcTCTCGTATTGTAATCATAGAAGGCATCTATGCCTTAAGTGAAAAATTACGACCTTTGCTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGATCTTGTCAAGCGTGTTTTGCGGGACATTCATCGTGCCGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTGTATCCTATGTATAAAGCTTTTATCGAGCCAGATCTCCAAACAGCCCATTTAAAAATTATTAACAAGTTTAATCCATTCTCTGGATTTCAGAATCCCACCTACATATTGAAGTCAGCAAGAACTGTGACAGTTGATCAAATAAAGGCAGTTATTGCTGCAGAGCATACTGAAACTAAAGAGGAAACATATGACATATTTCTTCTACCCCCTGGGGAAGACCCCGAAGCTTGTCAATCATATTTGAGAATGAGAAACCGTGATGGAAAGTACAATCTCATGTTTGAGGAATGGGTGACAGATAGTCCATTCATAATATCACCTAGAATTACTTTTGAAGTCAGCGTGCGCCTTCTTGGAGGGCTGATGGCCTTGGGATACACAATTGCAGCTATTCTGAAAAGAAGCAGCCATGTCTTTCATGATGATAAAGTGACCATAAAAACTGATTGGCTAGAACAACTTAATCGCACATATGTTCAGGTGCAAGGGAAAGACAGAAACTATTGCAAATTTTTTGCAGAGAAACTGGGGTTGGATGGTTCCTATGTTCCTCGCACTTACATTGAACAAATTCAGCTAGAAAAGCTTGTAAACGATGTGATGGCATTGCCAGATGATCTTAAGACAAAACTCAGCATAGATGATGACTTGGTTTCAAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGTATCTTAATCGCGGTATTTCACAATCCTATTCAACTCAAAGGGACAAGATTCTACCTAAGCTGACTAAACTTGCTATAAATAACAGAAGATTTGATGGAAGAGCACTAGAATCCCCTGCACCAATTGCTAACCAAGGAGTCATCACTCAACTTTCTGATCAAATTTCAACATTAAATGAAAGAATGGATGAATTCACCTCCCGTATTGAAGAGCTGAATTCAAAGTTCGCTATCAGAAAAGATTCAGCAGGCAGTCAACAAAACTTGGCTTTACAGGCTGAGGCCTGCAATGGCTCAGGCCCCACTTCCTTCTTTGTAACTGGACGAGGCAATGGTTCATTGACTGGATCATTGCTACCTAATTCATCATCATCTTCTCAGTTGGCTAAAGAGTCTCCCCTGATGGAAGAGGTATTAGTGATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACTCTGAGCAATCTTTTGCATGAATACTTTGGAGAAAGGTCACGCCTGGGAAGACCAGACCATACAGGAAGAATGCGTGAAGCTGAATCCGTCGCCGTCCCCCTGCTTCTGACTCTGGCCATTGGTGCTGTTGGTGTGCTTTTGTTCAGAGGTTTGACATCCCAAAAATAA 1986 0.4074 MAQDTVSGVDSPRGRLLRDQVQVVKKKDSDRYEIVPIQDSLSFEKGFFIFIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPIYDFKSSSRIGYRLTVEVPGSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIHRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHLKIINKFNPFSGFQNPTYILKSARTVTVDQIKAVIAAEHTETKEETYDIFLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVTIKTDWLEQLNRTYVQVQGKDRNYCKFFAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKTKLSIDDDLVSSPKEALSRASADRRMKYLNRGISQSYSTQRDKILPKLTKLAINNRRFDGRALESPAPIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFAIRKDSAGSQQNLALQAEACNGSGPTSFFVTGRGNGSLTGSLLPNSSSSSQLAKESPLMEEVLVIARGQRQIMHQLDTLSNLLHEYFGERSRLGRPDHTGRMREAESVAVPLLLTLAIGAVGVLLFRGLTSQK 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00157 661 PRINTS Uridine kinase signature 64 81 - -
Gma05g00157 661 PRINTS Uridine kinase signature 131 146 - -
Gma05g00157 661 PRINTS Uridine kinase signature 224 237 - -
Gma05g00157 661 PRINTS Uridine kinase signature 188 198 - -
Gma05g00157 661 PANTHER URIDINE-CYTIDINE KINASE C-LIKE ISOFORM X1 13 649 - -
Gma05g00157 661 Gene3D - 254 408 - -
Gma05g00157 661 Pfam CYTH domain 271 404 IPR023577 -
Gma05g00157 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 236 IPR027417 -
Gma05g00157 661 CDD UMPK_like 66 239 - -
Gma05g00157 661 Coils Coil 500 527 - -
Gma05g00157 661 Gene3D - 65 246 IPR027417 -
Gma05g00157 661 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Gma05g00157 661 Pfam Phosphoribulokinase / Uridine kinase family 67 236 IPR006083 GO:0005524|GO:0016301
Gma05g00157 661 SUPERFAMILY CYTH-like phosphatases 260 407 IPR033469 -
Gma05g00157 661 PANTHER URIDINE KINASE 13 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00157 Gma-Chr5 1510607 1518897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00157 66 321 PRT Gene Family AT5G40870 25.283 7.27e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00157 K00876 - gmx:100803122 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00157 05 1510607 1518897 Gma17g00785 17 6611494 6621296 ECH
Gma05g00157 05 1510607 1518897 Gma05g00157 05 1510607 1518897 ECH
Gma17g00785 17 6611494 6621296 Gma05g00157 05 1510607 1518897 GST
Gma07g02117 07 43015663 43032600 Gma05g00157 05 1510607 1518897 PCT
Gma20g00158 20 1624242 1644531 Gma05g00157 05 1510607 1518897 PCT