Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00140 ATGGCTATTCCCTACAAAGCCTCAAGCCCACTTTTCCTTTGCTTGATTCTTTCATGTGGTGACTCCCTTGTCAATTGCTCTGAGTTTGAAGTTGGAGGTCACGATGGTTGGGTTGTTCCAAAGCCAAAGGACGATGATCAAATGTACAATCAGTGGGCATCCCAAAACAGATTCAAAGTTAATGACACTCTTCTGTTCAAGTACGAGAGAGACTCGGTTATGGTGGTGACGGAAGAAGAGTATGAAAAATGCAAAGCCTCTCGTCCCCTCTTTTTCTCTAACAATGGTGACACAGTCTTCAAGTTTGACCGGCCAGGCTTGTTCTACTTCATTAGTGGGGTGAGTGGTCACTGTGACAGAGGGCAGCGGATGATCATCAAGGTTTTGGATGTGGAGCCAGCAGCACCCCCACCTCAATCTGCAAATGAGGATGCACAAAAACCACCACATAAAAAAAATGGAGTTGCTGAAATGATTCCTATGAGTATAATAACAACATCCACACTTTTTGTTTTGTCAACCTTCGTCCTTCAGCTTTATGCTTGA 546 0.4414 MAIPYKASSPLFLCLILSCGDSLVNCSEFEVGGHDGWVVPKPKDDDQMYNQWASQNRFKVNDTLLFKYERDSVMVVTEEEYEKCKASRPLFFSNNGDTVFKFDRPGLFYFISGVSGHCDRGQRMIIKVLDVEPAAPPPQSANEDAQKPPHKKNGVAEMIPMSIITTSTLFVLSTFVLQLYA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00140 181 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma05g00140 181 PANTHER EARLY NODULIN-LIKE PROTEIN 5 21 149 - -
Gma05g00140 181 PANTHER BLUE COPPER PROTEIN 21 149 IPR039391 GO:0009055
Gma05g00140 181 Gene3D - 26 132 IPR008972 -
Gma05g00140 181 Pfam Plastocyanin-like domain 47 122 IPR003245 GO:0009055
Gma05g00140 181 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Gma05g00140 181 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
Gma05g00140 181 CDD OsENODL1_like 28 129 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00140 Gma-Chr5 1387145 1388080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00140 10 177 Phytocyanin Superfamily AT1G48940 49.708 6.43e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00140 - - gmx:102667643 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00140 05 1387145 1388080 Gma05g00140 05 1387145 1388080 ECH