Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00116 ATGATAAAGCAAATTCTTAGCAAATTGCCAAAGAAGGTGCCAAAATCTGACTCGTCAGATTCTGCAAGGAGTGATTCTAGTAATACAACTACTTTTGGGAATGTTTTTCAGTGTACAAATGTTGGAAGTACCATTTCAAGCAAATTAAATGTTGTGAAGCGGGTATCTTCTGTTGTTTTCCCTGCAAGCATGAGTGCTGGAGTGGAAGCAGTTGACCCAGGTCTGTCCTTCAAAGATGTTTCAAATACACAGAAGCAAAGCCTGTTCATTAGTAAGTTGAATCTTTGCTGCAAACTTTATGACATGAGTGATCCTGATAAGAACACTGCAGAGCAAGATCTCAAACGACAAACGTTGTTGGAACTTGTTGATTTTGTTTCTTCTGGATCTGTTAAGTTCACAGAACCAGCAATCGCCGCATTGTGTAAAATGTGTGCAACTAATTTGTTCAGGGTTTTCCCACCAAAGTTTCGAACAAGTACTAGTGGTGGAGAAACAGAAGATGAAGAACCTATGTTTGATCCTGCCTGGTCTCACCTACAAGTTGTTTATGATCTACTCCTTCAATTCATCAATTATAACTCTCTTGATGTGAAGCTGGCAAAAGCACATGTAGATCATGCTTTTGTTCTAAGATTACTTGATCTTTTTGATTCAGAGGACCCTAGAGAAAGAGATTGCTTGAAAACAATTCTGCATAGAATCTATGGGAAGTTCATGGTTCATAGGCCTTTCATACGGAAATCTGTTAGCAACATCATCTACCGGTTTGTTTTTGAGACTGAGCGGCATAACGGAATCGCTGAGCTGTTGGAGATTTTTGGGAGTGTCATTAGTGGGTTTGCCTTGCCATTGAAGGAAGAGCACAAGATATTTTTGTGGAGGGCTCTAATTCCTTTGCACAAACCAAAATCTGTTGGTATTTATCACCAGCAGTTAACATATTGTGTTGTACAGTTCGTTGACAAGGATCAAAGACTGGCTAGCTCTGTGATAAAGGGACTATTGAAGTTCTGGCCAGTGACAAATAGCCAAAAGGAGCTCATGTTCATTAGTGAGTTGGAAGAGATTTTGGAAATGGCTAGCATGGCTGAGTTTCAGAAGATCATGGTCCCACTGTTCCGACGAATGGCTTGCTGCCTCAATAGTTCTCATTATCAGGTAGTGGCTGAAAGAGCACATTTGCTATGGAACAATGAGCACATTCTGAACCTGATAACGCAAAACAGACAGGTGATTCTGCCTCTGGTGTTCTCAGCACTTGTACATAATGCTCGAAGTCATTGGAACCAAGCAGTGCTGAACCTGACTCAGAACATAAGGAAGATGCTGTCTCAGATGGATGAAGAGCTGGTAGTTGCATGCCAACGCAGGATTGAGGAGGAAGATTCTAGTGCAAGTGCTGCAGCTGAGAGGAGAAGAGTAACATGGGAACGCATAGAAGCTGCTGCTGCTGCTGCAAGTACTAGTTGTGTCCAATCTTCTTCTGTAGGTGGAGGTGGAGATGTTTTAGTCCCATGTCAGCACCGTAACCCTGACTCCTTTATTCAGTTTTTCTTACCTGCTGGACCCCACTCTAGTCCCTTCCCCTGCAACTATGCGGTGTCTTTGCTACTTTCCCACACTCATTGCCCATATGCCAAACGCCACGAAGAAAAGGGTTGTCTTTATGCTTGTGTTCATTCGTGCAAATTAATCATCAATTTTATTTTATTTTTGCTGTCATTTGTTGACTGGTGGAGATGTTCACTGGGATTTGCAATTGCAGCTTGTTTGCCTTGTGTTGCTGCTTCTGCTGCTATGAGACCTGTGAGTGCTGTTTGGATGTGCTATGTTGCTGCTGCCCTTAGATATGAATGA 1860 0.4226 MIKQILSKLPKKVPKSDSSDSARSDSSNTTTFGNVFQCTNVGSTISSKLNVVKRVSSVVFPASMSAGVEAVDPGLSFKDVSNTQKQSLFISKLNLCCKLYDMSDPDKNTAEQDLKRQTLLELVDFVSSGSVKFTEPAIAALCKMCATNLFRVFPPKFRTSTSGGETEDEEPMFDPAWSHLQVVYDLLLQFINYNSLDVKLAKAHVDHAFVLRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKSVSNIIYRFVFETERHNGIAELLEIFGSVISGFALPLKEEHKIFLWRALIPLHKPKSVGIYHQQLTYCVVQFVDKDQRLASSVIKGLLKFWPVTNSQKELMFISELEEILEMASMAEFQKIMVPLFRRMACCLNSSHYQVVAERAHLLWNNEHILNLITQNRQVILPLVFSALVHNARSHWNQAVLNLTQNIRKMLSQMDEELVVACQRRIEEEDSSASAAAERRRVTWERIEAAAAAASTSCVQSSSVGGGGDVLVPCQHRNPDSFIQFFLPAGPHSSPFPCNYAVSLLLSHTHCPYAKRHEEKGCLYACVHSCKLIINFILFLLSFVDWWRCSLGFAIAACLPCVAASAAMRPVSAVWMCYVAAALRYE 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00116 619 Gene3D - 82 483 IPR011989 -
Gma05g00116 619 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma05g00116 619 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 492 - -
Gma05g00116 619 MobiDBLite consensus disorder prediction 1 28 - -
Gma05g00116 619 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma05g00116 619 SUPERFAMILY ARM repeat 86 461 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00116 Gma-Chr5 1131455 1136810 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00116 K11584 - gmx:100814349 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00116 05 1131455 1136810 Gma05g00116 05 1131455 1136810 ECH
Gma17g01129 17 9745594 9749082 Gma05g00116 05 1131455 1136810 GST