Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00110 ATGGCATCACCCTCAGAACTAAGTCTGGATTGCAAGCCTCAAAGCTATTCCTTGCTACTCAAATCATTTGGAGATCAAACTGATCATTCCTACAAGCTTGAAGAATTCCTCAATCGCTTGGAGGAAGAACGCCTCAAGATTGATGCTTTCAAGCGCGAGCTTCCTCTCTGCATGCAACTTCTCACCAATGCCATGGAAGCTTCAAGGCAGCAACTTCAGGCCTTTAAAGTAAACCATGGAGCAAAGCCAGTTCTGGAAGAATTCATACCCATGAAGCACTTAGCCTCAGAGAGCTCAGAGAAGGCAACAAACATGTCTGACAAGGCAAATTGGATGACATCAGCACAACTATGGAGCCAAGCATCAAGCGAAGGAACCAAACAACAACCACCAATCACAACCCTTAAAGAATCTGATATAGGCTTCAGCATAAGCCCAAAGTTGGCTCTTGACAACAAACAAAGGAACGGTGGAGGAGCCTTCCTTCCATTCTCCAAAGAGAGAAACTCTTGCCAGGGCTCTACATTGCGGCCTCTCCCTGAACTTGTTCTTGCCTCTGCGGAGAAAGAAATGGAGGATAAGAAACGTGCAGAGGTAGAAATTAAGGGAGTTTCGTGTCAGAGTAGGAAGGAGAATTCAGGAAGTGATGGAGCTGTGGTTGATCAAGGAAAAGGTGGTAGCCCAGTTGCATCGTCTCATGCACAAACAACCACAACCACTACTAGTGCACAAACTCATAGGAAAGCTAGAAGGTGTTGGTCACCAGACCTGCACCGAAGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCACAAGTGGCGACCCCAAAACAGATAAGGGAGTTGATGAAGGTTGACGGTTTGACCAATGATGAAGTAAAAAGCCATTTGCAGAAATATAGGCTTCACACAAGAAGACCCAGTCCAAGTCCTCAAGCGGGTGCAGCAGCACCACAGCTTGTGGTCCTCGGCGGAATCTGGGTCCCACCGGAATATGCCACGGCGGCACACACAGCCACCCCTACTCTCTACGGCGCCCACCCAACCTCTCACGCGCCGCCGCCACACTACTGCGCCGCCACTCCCATGCCACAAGACTTCTACACCGCGGCGCCGCCCCAGCCGCTGCTTCCGCCACCTCCGCAGCACCACAACGCTTTGCACCACCTGCACATGTACAAGGCGGCGTCCCACGGCCATGGATCGCCGGAATCTGACGTTCCCGGCGGCGGGGAGCGGTCGGAGAGTATTGAGGATGGCAAGTCGGAGAGTAGCAGCTGGAAGGGGGAGAGTGGGGAGAACGAAGGGGAGAGGAAAGGGATTGGTGAAGAGAGCAATGGGAGTGAGATCACTCTCAAATTCTAG 1365 0.5128 MASPSELSLDCKPQSYSLLLKSFGDQTDHSYKLEEFLNRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFKVNHGAKPVLEEFIPMKHLASESSEKATNMSDKANWMTSAQLWSQASSEGTKQQPPITTLKESDIGFSISPKLALDNKQRNGGGAFLPFSKERNSCQGSTLRPLPELVLASAEKEMEDKKRAEVEIKGVSCQSRKENSGSDGAVVDQGKGGSPVASSHAQTTTTTTSAQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAGAAAPQLVVLGGIWVPPEYATAAHTATPTLYGAHPTSHAPPPHYCAATPMPQDFYTAAPPQPLLPPPPQHHNALHHLHMYKAASHGHGSPESDVPGGGERSESIEDGKSESSSWKGESGENEGERKGIGEESNGSEITLKF 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00110 454 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 454 IPR044787 GO:0003700|GO:0006355
Gma05g00110 454 Coils Coil 33 53 - -
Gma05g00110 454 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 248 303 IPR006447 GO:0003677
Gma05g00110 454 MobiDBLite consensus disorder prediction 228 248 - -
Gma05g00110 454 MobiDBLite consensus disorder prediction 395 454 - -
Gma05g00110 454 SUPERFAMILY Homeodomain-like 245 306 IPR009057 -
Gma05g00110 454 Pfam Myb-like DNA-binding domain 250 301 IPR001005 -
Gma05g00110 454 Gene3D - 247 305 - -
Gma05g00110 454 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 305 IPR017930 -
Gma05g00110 454 Coils Coil 58 78 - -
Gma05g00110 454 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 454 - -
Gma05g00110 454 MobiDBLite consensus disorder prediction 205 251 - -
Gma05g00110 454 MobiDBLite consensus disorder prediction 411 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00110 Gma-Chr5 1042442 1045400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00110 1 454 G2-like Transcription Factor Family AT2G03500 49.491 5.29e-129 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma05g00110 Myb_DNA-binding 9.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00110 - - gmx:100807925 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00110 05 1042442 1045400 Gma05g00110 05 1042442 1045400 ECH