Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00105 ATGGAAAAGAAAAAGGTGGCAGTTCCCCTCGTGTGCCACGGTCATTCTCGCCCTGTGGTTGATCTCTTCTACAGTCCCGTTACGCCTGATGGGTTTTTCCTCATCAGTGCCAGCAAGGATTCGAGTCCTATGCTCAGAAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCTGTGTGGAGTTGCTGCTTGGATACCAGTGCCTTACGTGCCGCAACTGCTTCTGCTGATTTCTCAACGAAAGTTTGGGATGCTTTAACAGGAGATGAATTGCACTCTTTTGAGCATAAGCACATTGTTCGAGCATGTGCTTTTTCTGAGGATACTCACCTTTTGCTCACTGGGGGAGTTGAGAAAATTCTCCGGATCTATGATATGAATAGGCCTGATGCGCCACCCAGAGAAGTGGATAAGTCCCCTGGTTCTGTCAGAACTGTTGCCTGGCTTCATAGTGACCAGACAATATTGAGTTCATGTACTGATATGGGAGGTGTCAGgttatgggatgtaagaagtggtaaaatagtccagacacttgaaactaagtcaTCTGTGACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATAACCACTGCTGATGGTTCTACTGTAAAGTTTTGGGATGCGAACTACTATGGATTGGTGAAGAGCTATGATATGCCCTGCACTGTGGAATCAGTTTCACTGGAGCCTAAGTATGGGAACAAGTTCGTTGCCGGCGGAGAAGATATGTGGGTTCGTGTGTTTGATTTCCATACAGGGAATGAGATTGCATGCAACAAGGGGCACCACGGTCCTGTCCACTGTGTTCGTTTTTCTCCTGGTGGAGAATCCTATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACTGGCCCCTTGACCCTCGATGACTCAGAGACTGTGTCTGCAAATGGTTCAGTTGATAAGGTGAAGGAAACTGCAGATGAGGTTTCACGCAAGATTGAGGGTTTTCAAATTGCAGATGAGGGGAAATCTAAAGAAAAGGATGAGGCTGTGGAGGAATCAAGCTAA 1059 0.4495 MEKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTSALRAATASADFSTKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRSGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANYYGLVKSYDMPCTVESVSLEPKYGNKFVAGGEDMWVRVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTLDDSETVSANGSVDKVKETADEVSRKIEGFQIADEGKSKEKDEAVEESS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00105 352 PANTHER OS02G0205400 PROTEIN 1 345 - -
Gma05g00105 352 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 345 - -
Gma05g00105 352 Gene3D - 9 326 IPR015943 GO:0005515
Gma05g00105 352 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
Gma05g00105 352 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Gma05g00105 352 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Gma05g00105 352 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Gma05g00105 352 Pfam WD domain, G-beta repeat 265 297 IPR001680 GO:0005515
Gma05g00105 352 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
Gma05g00105 352 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Gma05g00105 352 CDD WD40 14 298 - -
Gma05g00105 352 SUPERFAMILY WD40 repeat-like 6 298 IPR036322 GO:0005515
Gma05g00105 352 SMART WD40_4 217 256 IPR001680 GO:0005515
Gma05g00105 352 SMART WD40_4 177 214 IPR001680 GO:0005515
Gma05g00105 352 SMART WD40_4 259 298 IPR001680 GO:0005515
Gma05g00105 352 SMART WD40_4 92 130 IPR001680 GO:0005515
Gma05g00105 352 SMART WD40_4 134 174 IPR001680 GO:0005515
Gma05g00105 352 SMART WD40_4 50 89 IPR001680 GO:0005515
Gma05g00105 352 SMART WD40_4 5 47 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00105 Gma-Chr5 971438 977774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00105 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 28.528 7.94e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00105 K13137 - gmx:100818422 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00105 05 971438 977774 Gma05g00105 05 971438 977774 ECH