Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00088 atgttaccagctgcacccaccatgaatactcctattatcgtcaccactatcaccaccacacGGGACGAACCCGACTATGATAGCAGCTCCTCTTCGATTACGGTGCCCGAATCGAGCAGGAGCTGGATGACCAACCTCAGCTTTGGCAGCCGGCGCCGCCGGAGCTCGGTCTCCGTCAGCTCCTCCACCATGGAGAGCCCGCACGCGAAGCCTCACAAGGCCAACCAGGCTGCATGGGAGGCGATGCGGCGGCTCTGGCGGGACAAGGGGCAGGTGGGGCTGGACCACTTCCGGCTGCTGCGGCGGCTGGGGAGCGGCGACTTAGGGAACGTGTACCTTTGCCAGATAAGGAACCCCGTGGTGGGGTTGCCGCAGTGTTTTTATGCAATGAAAGTGGTGGACAGAGAGGCACTTGCTATAAGGAAGAAGCTGCAGAGGGCGGAGATGGAGAAGGAGATTCTGGCCATGCTTGATCACCCCTTCTTGCCTACTTTGTACACTGAGTTTGACGCTTCTCATTACTCTTGCTTAGTCATGGAGTTCTGCCCCGGTGGAGACTTGTATGCAGCTCGCCAACGCCAGCCCGGGAAGCGCTTTTCCATAGCATCCGCTAAGTTTTATGCGGCTGAGACACTATTGGCACTAGAGTATCTTCACATGATGGGCATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTTGTGAGGGAGGATGGGCACATCATGCTTACAGATTTTGATCTTTCGCTCAAATGTGACGTTATCCCGAAGCTGTTAAGGAGCAAGACCAGATTGGAACGCAGCATCAAGAGTACAAAGAGATCTGTGCCAGCCTGCACTGCCCCCATGCAGCCTGTGTTGTCATGTTTCTTATCATCAAGCAAGAAAAAGAAAGCGACTGTGACAACAGTTATAAGGGAAAATGTTGAGGTGGAAGAAAATGATCCAGAGCTGGTGGCTGAGCCTATTGATGCCAAGTCCAAGTCATTTGTAGGGACACACGAGTACTTGGCACCAGAAGTGATTCTGGGCCAAGGACATGGGAGTGCAGTGGATTGGTGGACGTTTGGGGTGTTCTTGTATGAGATGTTATATGGTAGAACACCCTTCAAAGGTGAAAATAATGAGAAAACACTCGTCAACATTTTGAAGCAGCCATTATCTTTCCCTAGAATTGCAGTTAGCAGCAGCAAGGAGTTTGAAGAGATGGTGAAAGTTCAGGACCTTATAAGCAAGTTGTTGGTGAAGAATCCTAGTAAGAGAATTGGAAGCTGCATGGGTTCTGTTGAGATCAAAAGGCACGAGTTCTTCAAGGGTGTAAATTGGGCCTTAATTAGATCAGTTAGGCCCCCTGAGGTCCCTAGTGAAATAAACAAAATTAGGAGTAGGGTTTTGCTACCAAAACTTAGCAAAACAGACAGCGATCAGCCTTATCAGCTTAGAAGTCATCATTTTGAATACTTCTAA 1467 0.4778 MLPAAPTMNTPIIVTTITTTRDEPDYDSSSSSITVPESSRSWMTNLSFGSRRRRSSVSVSSSTMESPHAKPHKANQAAWEAMRRLWRDKGQVGLDHFRLLRRLGSGDLGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSIASAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLTDFDLSLKCDVIPKLLRSKTRLERSIKSTKRSVPACTAPMQPVLSCFLSSSKKKKATVTTVIRENVEVEENDPELVAEPIDAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLSFPRIAVSSSKEFEEMVKVQDLISKLLVKNPSKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPSEINKIRSRVLLPKLSKTDSDQPYQLRSHHFEYF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00088 488 Coils Coil 130 150 - -
Gma05g00088 488 SMART serkin_6 97 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00088 488 Gene3D Transferase(Phosphotransferase) domain 1 182 250 - -
Gma05g00088 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Gma05g00088 488 SUPERFAMILY Protein kinase-like (PK-like) 75 461 IPR011009 -
Gma05g00088 488 Pfam Protein kinase domain 98 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00088 488 Pfam Protein kinase domain 326 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00088 488 MobiDBLite consensus disorder prediction 53 74 - -
Gma05g00088 488 MobiDBLite consensus disorder prediction 53 69 - -
Gma05g00088 488 PANTHER PROTEIN KINASE PINOID 2 18 488 - -
Gma05g00088 488 Gene3D Transferase(Phosphotransferase) domain 1 324 455 - -
Gma05g00088 488 PANTHER FLIPPASE KINASE 1-RELATED 18 488 - -
Gma05g00088 488 CDD STKc_phototropin_like 95 454 - -
Gma05g00088 488 ProSiteProfiles Protein kinase domain profile. 97 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00088 488 Gene3D Phosphorylase Kinase; domain 1 95 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00088 Gma-Chr5 837843 839962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00088 15 488 AGC Kinase Gene Family AT2G26700 58.083 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma05g00088 Pkinase 5.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00088 K08286 - gmx:100777988 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00088 05 837843 839962 Gma05g00088 05 837843 839962 ECH