LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma05g00079	ATGGCTGCTTTCTTGAGAAGGTTTGCGAGGGCCACTCCGATCCTATTCGCTGCCCAATCCAATTCCTCTCACACCAATCTCCGCCTTCCCTTCACTGCCATCGCCGCCATTTCCGGCGGAGTCTCCTTCCTTTACTACCATTCCTCTCCCAACTTCGCTCATTCACAAGAAGCAGAACAAGTGGAAAGTAAAAACATCGCACTCGTTCCGGATAAATGGGTCGAGTTTAAGTTGCAGGACACTGCCAGGGTTAGTCACAATACCCAGCTATTCAGGTTTTCATTTGATCCCACTCAGAAATTGGGTCTGGATATTGCCTCTTGCATCCTTACAAGGGCTCCATTGGGACAAGATGCTGAAGGAAAACCAAAATTTGTTATACGCCCGTACACTCCTATTTCAGATCCACAATCAAAGGGATATTTTGATTTGCTTATCAAGGTATATCCTGAAGGGAAAATGAGCCAGCATTTTGCAAGCTTAAAACCGGGTGATGTTGTTGAAGTGAAAGGCCCCATTGAAAAGCTCAGATATACTCCTAATATGAAGAAGCATATTGGCATGATTGCTGGAGGCACAGGAATTACTCCTATGCTTCAGGTAATTGAAGCTATATTGAAGAATCCTGATGACAAAACTCAGATATCTTTACTTTATGCTAATGTCTCCCCGGATGACATACTGCTTAAACAAAAGCTTGACATTCTAGCAACAAGCCACCCAAACTTAAAGATATTCTACACTGTAGATAATCCAACAAAAAATTGGAGAGGAGGTGCGGGGTACATATCAAAGGATATTGTTGTGAAAGGCTTACCCGGCCCTAGTGATGATACTCTTATACTTGTGTGTGGACCCCCTGGTATGATGAAAGCAATATCTGGAGAAAAGGCCAAGGACTGGACACAGGGAGAGGTTTCTGGCGTCCTAAAAGAGGCTGGATACACTGAACAAATGGTATACAAATTCTGA	972	0.4372	MAAFLRRFARATPILFAAQSNSSHTNLRLPFTAIAAISGGVSFLYYHSSPNFAHSQEAEQVESKNIALVPDKWVEFKLQDTARVSHNTQLFRFSFDPTQKLGLDIASCILTRAPLGQDAEGKPKFVIRPYTPISDPQSKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDKTQISLLYANVSPDDILLKQKLDILATSHPNLKIFYTVDNPTKNWRGGAGYISKDIVVKGLPGPSDDTLILVCGPPGMMKAISGEKAKDWTQGEVSGVLKEAGYTEQMVYKF	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma05g00079	323	SUPERFAMILY	Riboflavin synthase domain-like	66	181	IPR017938	-
	Gma05g00079	323	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	71	179	IPR017927	GO:0016491
	Gma05g00079	323	PRINTS	Cytochrome B5 reductase signature	128	135	-	-
	Gma05g00079	323	PRINTS	Cytochrome B5 reductase signature	164	178	-	-
	Gma05g00079	323	PRINTS	Cytochrome B5 reductase signature	187	206	-	-
	Gma05g00079	323	PRINTS	Cytochrome B5 reductase signature	225	236	-	-
	Gma05g00079	323	PRINTS	Cytochrome B5 reductase signature	280	288	-	-
	Gma05g00079	323	Gene3D	-	170	323	IPR039261	-
	Gma05g00079	323	Pfam	Oxidoreductase FAD-binding domain	76	178	IPR008333	-
	Gma05g00079	323	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	128	135	IPR001709	GO:0016491
	Gma05g00079	323	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	187	206	IPR001709	GO:0016491
	Gma05g00079	323	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	225	236	IPR001709	GO:0016491
	Gma05g00079	323	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	280	288	IPR001709	GO:0016491
	Gma05g00079	323	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	165	321	IPR039261	-
	Gma05g00079	323	CDD	cyt_b5_reduct_like	76	323	-	-
	Gma05g00079	323	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	28	323	IPR001834	GO:0016491
	Gma05g00079	323	PANTHER	NADH-CYTOCHROME B5 REDUCTASE-LIKE	28	323	-	-
	Gma05g00079	323	Gene3D	Translation factors	66	169	-	-
	Gma05g00079	323	Pfam	Oxidoreductase NAD-binding domain	188	294	IPR001433	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma05g00079	Gma-Chr5	773474	779168	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma05g00079	62	323	NADPH P450 reductases	AT5G17770	41.667	1.80e-66	208

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma05g00079	K00326		-	gmx:100781191	642.884